DMR 31506 chr11:13030151-13030350 (200bp)

DMR Stats
Positionchr11:13030151-13030350 (View on UCSC)
Width200bp
Genomic Contextpromoter
Nearest GenesRASSF10 (619bp away)
ANODEV p-value1.09523372827e-09
FrequenciesBenign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
31506 chr11 13030086 13030155 wgEncodeRegDnaseClusteredV2 2 score:262, srow:193254
31506 chr11 13030166 13030415 wgEncodeRegDnaseClusteredV2 16 score:845, srow:193255
31506 chr11 13030074 13030397 wgEncodeRegTfbsClusteredV3 SP1 score:216, expCount:1, expNums:153, expScores:216, srow:667533
31506 chr11 13030252 13030501 wgEncodeRegTfbsClusteredV3 TEAD4 score:382, expCount:1, expNums:160, expScores:382, srow:667534
31506 chr11 13030256 13030925 wgEncodeRegTfbsClusteredV3 RBBP5 score:357, expCount:1, expNums:8, expScores:357, srow:667535
31506 chr11 13030280 13030689 wgEncodeRegTfbsClusteredV3 GATA2 score:542, expCount:1, expNums:586, expScores:542, srow:667536
31506 chr11 13030344 13032658 wgEncodeRegTfbsClusteredV3 EZH2 score:525, expCount:6, expNums:6,17,21,36,38,43, expScores:388,162,377,246,243,313, srow:667537
31506 chr11 13030331 13032584 cpgIsland CpG: 209 length:2254, cpgNum:209, gcNum:1463, perCpg:18.5, perGc:64.9, obsExp:0.89, srow:3892
31506 chr11 13028331 13030330 cpgShore — values(x.gr)[overs$srow, ]:7140
  • 9 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
31506 cellmeth_recounts PrEC: 1, LNCaP: 345, DU145: 1
31506 cellmeth_diffreps_PrECvsLNCaP A=9, B=4414, Length=3020, Event=Up, log2FC=8.94, padj=0
31506 cellmeth_diffreps_LNCaPvsDU145 A=4718.76, B=17.77, Length=3000, Event=Down, log2FC=-8.05, padj=0
31506 cellexp id=ENSG00000254670, name=CTC-497E21.3, PrEC=24, str=34, LNCaP=0, str=1, DU145=2, str=1
31506 tcgameth site:cg08148891, B=0.17, L=0.44, H=0.43