DMR 31681 chr11:62692951-62695050 (2100bp)
| DMR Stats | |
|---|---|
| Position | chr11:62692951-62695050 (View on UCSC) |
| Width | 2100bp |
| Genomic Context | intergenic |
| Nearest Genes | CHRM1 (3938bp away) |
| ANODEV p-value | 4.11291749338e-06 |
| Frequencies | Benign: 1.0 (14.29%), Low: 6.0 (100.0%), High: 8.0 (88.89 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 31681 | chr11 | 62692806 | 62693895 | wgEncodeRegDnaseClusteredV2 | 45 | score:1000, srow:210736 |
| 31681 | chr11 | 62694046 | 62694395 | wgEncodeRegDnaseClusteredV2 | 17 | score:617, srow:210737 |
| 31681 | chr11 | 62694646 | 62694975 | wgEncodeRegDnaseClusteredV2 | 10 | score:604, srow:210738 |
| 31681 | chr11 | 62694981 | 62695155 | wgEncodeRegDnaseClusteredV2 | 8 | score:200, srow:210739 |
| 31681 | chr11 | 62692841 | 62693440 | wgEncodeRegTfbsClusteredV3 | CTBP2 | score:138, expCount:1, expNums:348, expScores:138, srow:731815 |
| 31681 | chr11 | 62692861 | 62693110 | wgEncodeRegTfbsClusteredV3 | TEAD4 | score:325, expCount:1, expNums:160, expScores:325, srow:731816 |
| 31681 | chr11 | 62693156 | 62694552 | wgEncodeRegTfbsClusteredV3 | EZH2 | score:724, expCount:7, expNums:6,15,17,19,21,36,43, expScores:340,350,182,93,496,322,537, srow:731817 |
| 31681 | chr11 | 62693358 | 62693647 | wgEncodeRegTfbsClusteredV3 | ZNF143 | score:221, expCount:1, expNums:361, expScores:221, srow:731818 |
| 31681 | chr11 | 62693808 | 62693831 | tfbsConsSites | V$COMP1_01 | score:836, zScore:2.75, srow:894874 |
| 31681 | chr11 | 62693809 | 62693823 | tfbsConsSites | V$E2F_01 | score:763, zScore:1.78, srow:894875 |
| 31681 | chr11 | 62693844 | 62693848 | phastConsElements100way | lod=19 | score:285, srow:1533161 |
| 31681 | chr11 | 62693374 | 62694772 | cpgIsland | CpG: 114 | length:1399, cpgNum:114, gcNum:853, perCpg:16.3, perGc:61, obsExp:0.88, srow:4238 |
| 31681 | chr11 | 62691489 | 62693373 | cpgShore | — | values(x.gr)[overs$srow, ]:7775 |
| 31681 | chr11 | 62694773 | 62696772 | cpgShore | — | values(x.gr)[overs$srow, ]:7776 |
- 14 featuress
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 31681 | cellmeth_recounts | PrEC: 77, LNCaP: 115, DU145: 60 |  |
| 31681 | cellmeth_diffreps_PrECvsLNCaP | A=26, B=7, Length=320, Event=Down, log2FC=-1.89, padj=0.0200230652767817 |  |
| 31681 | cellmeth_diffreps_PrECvsDU145 | A=29, B=3, Length=360, Event=Down, log2FC=-3.27, padj=4.95444326613098e-05 |  |
| 31681 | cellmeth_diffreps_PrECvsDU145 | A=40, B=6, Length=380, Event=Down, log2FC=-2.74, padj=8.50006051060443e-06 |  |
| 31681 | cellmeth_diffreps_PrECvsDU145 | A=26, B=3, Length=320, Event=Down, log2FC=-3.12, padj=0.00026623438066776 |  |
| 31681 | cellmeth_diffreps_LNCaPvsDU145 | A=38.49, B=4.68, Length=360, Event=Down, log2FC=-3.04, padj=9.98631028366022e-06 |  |
| 31681 | tcgameth | site:cg01861825, B=0.38, L=0.53, H=0.54 |  |
| 31681 | tcgameth | site:cg09178025, B=0.83, L=0.84, H=0.84 |  |
| 31681 | tcgameth | site:cg17206850, B=0.25, L=0.46, H=0.48 |  |
| 31681 | tcgameth | site:cg17641649, B=0.71, L=0.81, H=0.82 |  |
| 31681 | tcgameth | site:cg19200086, B=0.43, L=0.57, H=0.57 |  |
| 31681 | tcgameth | site:cg21030416, B=0.34, L=0.45, H=0.45 |  |
| 31681 | tcgameth | site:cg21968515, B=0.35, L=0.54, H=0.54 |  |