DMR 31950 chr11:130319851-130320250 (400bp)

DMR Stats
Positionchr11:130319851-130320250 (View on UCSC)
Width400bp
Genomic Contextintron
Nearest GenesADAMTS15 (0bp away)
ANODEV p-value0.000161470467409
FrequenciesBenign: 0.0 (0.0%), Low: 5.0 (83.33%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
31950 ADAMTS15 5849 uc010scd.2 chr11 130318869 130346539 + 400 100.0 0.33 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
31950 chr11 130319921 130320695 wgEncodeRegDnaseClusteredV2 74 score:1000, srow:246254
31950 chr11 130319227 130320036 wgEncodeRegTfbsClusteredV3 SUZ12 score:150, expCount:1, expNums:578, expScores:150, srow:852512
31950 chr11 130319816 130320425 wgEncodeRegTfbsClusteredV3 SP4 score:219, expCount:1, expNums:155, expScores:219, srow:852513
31950 chr11 130319879 130320154 wgEncodeRegTfbsClusteredV3 USF2 score:183, expCount:1, expNums:360, expScores:183, srow:852514
31950 chr11 130319902 130320091 wgEncodeRegTfbsClusteredV3 MAX score:718, expCount:1, expNums:352, expScores:718, srow:852515
31950 chr11 130319912 130320231 wgEncodeRegTfbsClusteredV3 NFYB score:200, expCount:1, expNums:517, expScores:200, srow:852516
31950 chr11 130319915 130320244 wgEncodeRegTfbsClusteredV3 CHD2 score:298, expCount:1, expNums:345, expScores:298, srow:852517
31950 chr11 130319918 130320241 wgEncodeRegTfbsClusteredV3 SP1 score:254, expCount:1, expNums:153, expScores:254, srow:852518
31950 chr11 130319923 130320363 wgEncodeRegTfbsClusteredV3 CTCF score:1000, expCount:52, expNums:5,14,16,18,20,24,35,37,39,42,44,137,213,262,267,463,493,609,635,639,640,641,642,643,644,645,646,657,658,659,660,661,662,664,668,669,671,672,673,674,675,676,678,679,682,683,684,685,686,687,688,689, expScores:1000,180,498,278,125,242,376,439,134,701,522,861,186,247,177,1000,162,587,147,729,1000,88,1000,420,1000,184,1000,1000,842,1000,468,1000,1000,213,190,499,459,1000,1000,1000,756,715,1000,124,1000,196,501,715,348,299,942,246, srow:852519
31950 chr11 130319933 130320172 wgEncodeRegTfbsClusteredV3 USF1 score:266, expCount:1, expNums:161, expScores:266, srow:852520
31950 chr11 130319995 130320284 wgEncodeRegTfbsClusteredV3 ZNF143 score:284, expCount:1, expNums:361, expScores:284, srow:852521
31950 chr11 130320041 130320273 wgEncodeRegTfbsClusteredV3 RAD21 score:1000, expCount:4, expNums:149,264,355,466, expScores:1000,546,1000,1000, srow:852522
31950 chr11 130320064 130320172 wgEncodeRegTfbsClusteredV3 ELF1 score:325, expCount:1, expNums:217, expScores:325, srow:852523
31950 chr11 130320060 130320083 tfbsConsSites V$COMP1_01 score:847, zScore:2.97, srow:1052031
31950 chr11 130320069 130320079 tfbsConsSites V$NFY_Q6 score:943, zScore:1.9, srow:1052032
31950 chr11 130320116 130320125 tfbsConsSites V$MYB_Q6 score:911, zScore:1.67, srow:1052033
31950 chr11 130320151 130320164 tfbsConsSites V$GATA1_02 score:847, zScore:1.94, srow:1052034
31950 chr11 130320154 130320162 tfbsConsSites V$LMO2COM_02 score:902, zScore:1.81, srow:1052035
31950 chr11 130319533 130320683 oreganno OREG0021518 id:OREG0021518, srow:5061
31950 chr11 130320051 130320062 phastConsElements100way lod=44 score:368, srow:1794080
31950 chr11 130320071 130320079 phastConsElements100way lod=38 score:354, srow:1794081
31950 chr11 130320102 130320106 phastConsElements100way lod=24 score:308, srow:1794082
31950 chr11 130320116 130320131 phastConsElements100way lod=41 score:361, srow:1794083
31950 chr11 130320159 130320177 phastConsElements100way lod=94 score:443, srow:1794084
31950 chr11 130318235 130320198 cpgIsland CpG: 172 length:1964, cpgNum:172, gcNum:1277, perCpg:17.5, perGc:65, obsExp:0.83, srow:4936
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  • 25 of 26 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
31950 cellmeth_recounts PrEC: 36, LNCaP: 39, DU145: 22
31950 cellmeth_diffreps_PrECvsDU145 A=46, B=10, Length=360, Event=Down, log2FC=-2.2, padj=3.73701528652538e-05
31950 cellexp id=ENSG00000166106, name=ADAMTS15, PrEC=314, str=434, LNCaP=113, str=51, DU145=764, str=582
31950 tcgaexp gene=ADAMTS15, entrez=170689, pos=chr11:130318869-130346539(+), B=84, L=30, M=38, H=43