DMR 31967 chr12:275951-276150 (200bp)

DMR Stats
Positionchr12:275951-276150 (View on UCSC)
Width200bp
Genomic Contextintron
Nearest GenesIQSEC3 (0bp away)
ANODEV p-value0.012972349828
FrequenciesBenign: 2.0 (28.57%), Low: 4.0 (66.67%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
31967 IQSEC3 5882 uc001qhu.1 chr12 186542 280494 + 200 100.0 1.77 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (100), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0) 0.0
31967 IQSEC3 5882 uc001qhw.2 chr12 176049 287625 + 200 100.0 4.25 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (100), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0) 0.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields

Omics Overlaps

Dmrid Omic Set Data Plot
31967 cellmeth_recounts PrEC: 7, LNCaP: 4, DU145: 0
31967 cellexp id=ENSG00000120645, name=IQSEC3, PrEC=1, str=4, LNCaP=5, str=2, DU145=3, str=3
31967 cellexp id=ENSG00000256540, name=RP11-598F7.6, PrEC=0, str=0, LNCaP=0, str=0, DU145=10, str=7
31967 tcgaexp gene=ZNF26, entrez=7574, pos=chr12:93510-133589154(+), B=419, L=392, M=412, H=512
31967 tcgaexp gene=ZNF84, entrez=7637, pos=chr12:42780-133639885(+), B=1626, L=1649, M=1716, H=2045
31967 tcgaexp gene=IQSEC3, entrez=440073, pos=chr12:176049-287625(+), B=193, L=82, M=63, H=58