DMR 32305 chr12:108168901-108169650 (750bp)

DMR Stats
Positionchr12:108168901-108169650 (View on UCSC)
Width750bp
Genomic Context3' end
Nearest GenesASCL4 (0bp away)
ANODEV p-value4.13150272129e-08
FrequenciesBenign: 0.0 (0.0%), Low: 6.0 (100.0%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
32305 ASCL4 6976 uc001tmr.3 chr12 108168162 108170421 + 750 100.0 0.03 0 0.0 E1 (100) 30.53
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
32305 chr12 108169026 108169535 wgEncodeRegDnaseClusteredV2 40 score:1000, srow:293051
32305 chr12 108169546 108169855 wgEncodeRegDnaseClusteredV2 3 score:163, srow:293052
32305 chr12 108168411 108170078 wgEncodeRegTfbsClusteredV3 EZH2 score:420, expCount:5, expNums:3,6,15,21,40, expScores:151,334,331,326,254, srow:1019173
32305 chr12 108168863 108169672 wgEncodeRegTfbsClusteredV3 SUZ12 score:217, expCount:1, expNums:578, expScores:217, srow:1019174
32305 chr12 108168982 108169581 wgEncodeRegTfbsClusteredV3 CTBP2 score:192, expCount:1, expNums:348, expScores:192, srow:1019175
32305 chr12 108169006 108169675 wgEncodeRegTfbsClusteredV3 RBBP5 score:236, expCount:1, expNums:8, expScores:236, srow:1019176
32305 chr12 108169008 108169377 wgEncodeRegTfbsClusteredV3 REST score:1000, expCount:8, expNums:98,144,188,226,248,252,257,258, expScores:626,1000,418,167,196,388,304,226, srow:1019177
32305 chr12 108169018 108169267 wgEncodeRegTfbsClusteredV3 NRF1 score:113, expCount:1, expNums:354, expScores:113, srow:1019178
32305 chr12 108169036 108169359 wgEncodeRegTfbsClusteredV3 CTCF score:492, expCount:12, expNums:5,137,597,603,605,609,635,650,665,683,687,688, expScores:492,430,234,258,141,472,166,133,277,178,448,336, srow:1019179
32305 chr12 108169042 108169317 wgEncodeRegTfbsClusteredV3 USF2 score:168, expCount:1, expNums:360, expScores:168, srow:1019180
32305 chr12 108169069 108169358 wgEncodeRegTfbsClusteredV3 ZNF143 score:242, expCount:1, expNums:361, expScores:242, srow:1019181
32305 chr12 108169077 108169320 wgEncodeRegTfbsClusteredV3 RAD21 score:546, expCount:2, expNums:149,355, expScores:546,315, srow:1019182
32305 chr12 108169083 108169602 wgEncodeRegTfbsClusteredV3 SIN3A score:181, expCount:1, expNums:357, expScores:181, srow:1019183
32305 chr12 108169093 108169468 wgEncodeRegTfbsClusteredV3 TBP score:153, expCount:1, expNums:359, expScores:153, srow:1019184
32305 chr12 108169110 108169439 wgEncodeRegTfbsClusteredV3 MAX score:157, expCount:1, expNums:352, expScores:157, srow:1019185
32305 chr12 108169132 108169381 wgEncodeRegTfbsClusteredV3 TEAD4 score:319, expCount:1, expNums:160, expScores:319, srow:1019186
32305 chr12 108169050 108169063 tfbsConsSites V$ROAZ_01 score:752, zScore:1.85, srow:1274920
32305 chr12 108169051 108169062 tfbsConsSites V$AP2_Q6 score:924, zScore:2.41, srow:1274921
32305 chr12 108169280 108169299 tfbsConsSites V$MYCMAX_03 score:801, zScore:1.98, srow:1274922
32305 chr12 108169280 108169299 tfbsConsSites V$ARNT_02 score:808, zScore:2.22, srow:1274923
32305 chr12 108169282 108169296 tfbsConsSites V$E47_01 score:906, zScore:2.43, srow:1274924
32305 chr12 108169284 108169295 tfbsConsSites V$LMO2COM_01 score:976, zScore:2.53, srow:1274925
32305 chr12 108169284 108169295 tfbsConsSites V$MYOD_01 score:943, zScore:2.6, srow:1274926
32305 chr12 108169311 108169338 tfbsConsSites V$PAX5_01 score:780, zScore:1.95, srow:1274927
32305 chr12 108169353 108169367 tfbsConsSites V$PBX1_02 score:799, zScore:1.76, srow:1274928
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  • 25 of 74 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
32305 cellmeth_recounts PrEC: 37, LNCaP: 287, DU145: 44
32305 cellmeth_diffreps_PrECvsLNCaP A=56, B=228, Length=800, Event=Up, log2FC=2.03, padj=0
32305 cellmeth_diffreps_PrECvsDU145 A=27, B=5, Length=280, Event=Down, log2FC=-2.43, padj=0.00174738210451335
32305 cellmeth_diffreps_LNCaPvsDU145 A=242.67, B=30.87, Length=840, Event=Down, log2FC=-2.97, padj=0
32305 cellexp id=ENSG00000187855, name=ASCL4, PrEC=0, str=0, LNCaP=2, str=3, DU145=0, str=0
32305 tcgameth site:cg01295392, B=0.55, L=0.72, H=0.7
32305 tcgameth site:cg04290586, B=0.43, L=0.64, H=0.63
32305 tcgameth site:cg20443254, B=0.33, L=0.71, H=0.66
32305 tcgameth site:cg24856726, B=0.35, L=0.6, H=0.56
32305 tcgaexp gene=ZNF26, entrez=7574, pos=chr12:93510-133589154(+), B=419, L=392, M=412, H=512
32305 tcgaexp gene=ZNF84, entrez=7637, pos=chr12:42780-133639885(+), B=1626, L=1649, M=1716, H=2045
32305 tcgaexp gene=ASCL4, entrez=121549, pos=chr12:108168162-108170421(+), B=5, L=4, M=4, H=4