DMR 32353 chr12:115200251-115200750 (500bp)
| DMR Stats | |
|---|---|
| Position | chr12:115200251-115200750 (View on UCSC) |
| Width | 500bp |
| Genomic Context | intergenic |
| Nearest Genes | TBX3 (78281bp away) |
| ANODEV p-value | 2.95168128548e-08 |
| Frequencies | Benign: 1.0 (14.29%), Low: 6.0 (100.0%), High: 9.0 (100.0 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 32353 | chr12 | 115200346 | 115200975 | wgEncodeRegDnaseClusteredV2 | 43 | score:1000, srow:298069 |
| 32353 | chr12 | 115199971 | 115200260 | wgEncodeRegTfbsClusteredV3 | CEBPB | score:713, expCount:5, expNums:277,378,426,462,477, expScores:342,199,234,713,205, srow:1036041 |
| 32353 | chr12 | 115200342 | 115200697 | wgEncodeRegTfbsClusteredV3 | BCL3 | score:293, expCount:1, expNums:83, expScores:293, srow:1036042 |
| 32353 | chr12 | 115200430 | 115200733 | wgEncodeRegTfbsClusteredV3 | FOXP2 | score:144, expCount:1, expNums:251, expScores:144, srow:1036043 |
| 32353 | chr12 | 115200672 | 115200738 | wgEncodeRegTfbsClusteredV3 | CEBPB | score:538, expCount:1, expNums:462, expScores:538, srow:1036044 |
| 32353 | chr12 | 115200580 | 115200587 | phastConsElements100way | lod=15 | score:262, srow:2227061 |
| 32353 | chr12 | 115200609 | 115200616 | phastConsElements100way | lod=19 | score:285, srow:2227062 |
| 32353 | chr12 | 115200628 | 115200641 | phastConsElements100way | lod=34 | score:343, srow:2227063 |
| 32353 | chr12 | 115200655 | 115200661 | phastConsElements100way | lod=21 | score:295, srow:2227064 |
| 32353 | chr12 | 115200675 | 115200686 | phastConsElements100way | lod=23 | score:304, srow:2227065 |
- 10 featuress
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 32353 | cellmeth_recounts | PrEC: 7, LNCaP: 111, DU145: 40 |  |
| 32353 | cellmeth_diffreps_PrECvsLNCaP | A=11, B=87, Length=440, Event=Up, log2FC=2.98, padj=2.67853354721823e-14 |  |
| 32353 | cellmeth_diffreps_PrECvsDU145 | A=0, B=11, Length=200, Event=Up, log2FC=Inf, padj=0.00313959514768542 |  |
| 32353 | cellmeth_diffreps_LNCaPvsDU145 | A=91.94, B=24.32, Length=400, Event=Down, log2FC=-1.92, padj=3.35959263905918e-08 |  |
| 32353 | cellexp | id=ENSG00000257817, name=RP4-601P9.2, PrEC=0, str=0, LNCaP=5, str=4, DU145=0, str=0 |  |
| 32353 | tcgaexp | gene=ZNF26, entrez=7574, pos=chr12:93510-133589154(+), B=419, L=392, M=412, H=512 |  |
| 32353 | tcgaexp | gene=ZNF84, entrez=7637, pos=chr12:42780-133639885(+), B=1626, L=1649, M=1716, H=2045 |  |