DMR 32409 chr12:124702051-124702350 (300bp)
| DMR Stats | |
|---|---|
| Position | chr12:124702051-124702350 (View on UCSC) |
| Width | 300bp |
| Genomic Context | intron |
| Nearest Genes | ZNF664-FAM101A (0bp away) |
| ANODEV p-value | 0.0225487737528 |
| Frequencies | Benign: 1.0 (14.29%), Low: 5.0 (83.33%), High: 7.0 (77.78 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32409 | ZNF664-FAM101A | 7197 | uc021rfy.1 | chr12 | 124457762 | 124800570 | + | 300 | 100.0 | 3.45 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (100), E4 (0), I4 (0), E5 (0) | 0.0 |
- 1 genes
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 32409 | chr12 | 124701926 | 124702155 | wgEncodeRegDnaseClusteredV2 | 3 | score:234, srow:304261 |
| 32409 | chr12 | 124702201 | 124702735 | wgEncodeRegDnaseClusteredV2 | 35 | score:545, srow:304262 |
| 32409 | chr12 | 124702257 | 124702566 | wgEncodeRegTfbsClusteredV3 | PAX5 | score:633, expCount:2, expNums:100,101, expScores:633,255, srow:1059784 |
| 32409 | chr12 | 124702206 | 124702207 | phastConsElements100way | lod=13 | score:247, srow:2265812 |
- 4 featuress
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 32409 | cellmeth_recounts | PrEC: 1, LNCaP: 11, DU145: 17 |  |
| 32409 | cellexp | id=ENSG00000178882, name=FAM101A, PrEC=1, str=355, LNCaP=1, str=0, DU145=4, str=0 |  |
| 32409 | tcgameth | site:cg07292311, B=0.32, L=0.48, H=0.42 |  |
| 32409 | tcgameth | site:cg10663316, B=0.33, L=0.57, H=0.46 |  |
| 32409 | tcgaexp | gene=ZNF26, entrez=7574, pos=chr12:93510-133589154(+), B=419, L=392, M=412, H=512 |  |
| 32409 | tcgaexp | gene=ZNF84, entrez=7637, pos=chr12:42780-133639885(+), B=1626, L=1649, M=1716, H=2045 |  |