DMR 32800 chr14:38678801-38679900 (1100bp)

DMR Stats
Positionchr14:38678801-38679900 (View on UCSC)
Width1100bp
Genomic Contextpromoter
Nearest GenesSSTR1 (0bp away)
ANODEV p-value4.06609304408e-08
FrequenciesBenign: 0.0 (0.0%), Low: 5.0 (83.33%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
32800 SSTR1 8166 uc001wul.1 chr14 38677204 38682268 + 1100 100.0 1.43 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (100) 0.0
32800 SSTR1 8166 uc021rsi.1 chr14 38678595 38679770 + 970 88.18 0.15 0 26.73 E1 (88.18) 100.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
32800 chr14 38676626 38680415 wgEncodeRegDnaseClusteredV2 103 score:906, srow:350804
32800 chr14 38676494 38679051 wgEncodeRegTfbsClusteredV3 POLR2A score:1000, expCount:7, expNums:146,147,168,402,610,613,637, expScores:360,358,421,690,175,259,191, srow:1197970
32800 chr14 38677340 38678874 wgEncodeRegTfbsClusteredV3 EZH2 score:550, expCount:4, expNums:6,13,36,40, expScores:496,550,263,288, srow:1197989
32800 chr14 38678304 38679177 wgEncodeRegTfbsClusteredV3 RBBP5 score:241, expCount:1, expNums:8, expScores:184, srow:1198005
32800 chr14 38678807 38679062 wgEncodeRegTfbsClusteredV3 CEBPB score:260, expCount:1, expNums:462, expScores:260, srow:1198010
32800 chr14 38678861 38679100 wgEncodeRegTfbsClusteredV3 REST score:157, expCount:1, expNums:188, expScores:157, srow:1198011
32800 chr14 38678883 38679082 wgEncodeRegTfbsClusteredV3 CTCF score:204, expCount:1, expNums:597, expScores:204, srow:1198012
32800 chr14 38678942 38679361 wgEncodeRegTfbsClusteredV3 TAF1 score:195, expCount:1, expNums:199, expScores:195, srow:1198013
32800 chr14 38679280 38679889 wgEncodeRegTfbsClusteredV3 POLR2A score:238, expCount:1, expNums:465, expScores:238, srow:1198014
32800 chr14 38679308 38679707 wgEncodeRegTfbsClusteredV3 FOS score:750, expCount:2, expNums:457,557, expScores:750,253, srow:1198015
32800 chr14 38679369 38679664 wgEncodeRegTfbsClusteredV3 JUN score:159, expCount:1, expNums:458, expScores:159, srow:1198016
32800 chr14 38679518 38679773 wgEncodeRegTfbsClusteredV3 CEBPB score:313, expCount:1, expNums:462, expScores:313, srow:1198017
32800 chr14 38678790 38678803 tfbsConsSites V$FAC1_01 score:833, zScore:1.64, srow:1530888
32800 chr14 38678812 38678824 tfbsConsSites V$CEBP_01 score:923, zScore:2.26, srow:1530889
32800 chr14 38678813 38678824 tfbsConsSites V$IK2_01 score:950, zScore:2.02, srow:1530890
32800 chr14 38678813 38678825 tfbsConsSites V$IK1_01 score:881, zScore:2.25, srow:1530891
32800 chr14 38678813 38678825 tfbsConsSites V$IK3_01 score:864, zScore:1.95, srow:1530892
32800 chr14 38678895 38678910 tfbsConsSites V$BRN2_01 score:817, zScore:2.02, srow:1530893
32800 chr14 38678913 38678935 tfbsConsSites V$PPARG_02 score:682, zScore:1.68, srow:1530894
32800 chr14 38678947 38678965 tfbsConsSites V$AHRARNT_02 score:791, zScore:2.05, srow:1530895
32800 chr14 38678949 38678962 tfbsConsSites V$CEBPB_02 score:951, zScore:3.79, srow:1530896
32800 chr14 38678951 38678960 tfbsConsSites V$HLF_01 score:913, zScore:2.57, srow:1530897
32800 chr14 38678953 38678968 tfbsConsSites V$ARP1_01 score:834, zScore:2.58, srow:1530898
32800 chr14 38678957 38678980 tfbsConsSites V$BRACH_01 score:679, zScore:1.67, srow:1530899
32800 chr14 38678961 38678974 tfbsConsSites V$ROAZ_01 score:764, zScore:2.04, srow:1530900
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  • 25 of 187 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
32800 cellmeth_recounts PrEC: 8, LNCaP: 324, DU145: 77
32800 cellmeth_diffreps_PrECvsLNCaP A=12, B=318, Length=1700, Event=Up, log2FC=4.73, padj=0
32800 cellmeth_diffreps_PrECvsDU145 A=3, B=23, Length=340, Event=Up, log2FC=2.94, padj=0.00126170979457872
32800 cellmeth_diffreps_LNCaPvsDU145 A=272.61, B=44.9, Length=1200, Event=Down, log2FC=-2.6, padj=0
32800 cellmeth_diffreps_LNCaPvsDU145 A=59.87, B=8.42, Length=420, Event=Down, log2FC=-2.83, padj=1.42093878864675e-08
32800 cellexp id=ENSG00000139874, name=SSTR1, PrEC=0, str=2, LNCaP=4, str=1, DU145=0, str=0
32800 tcgameth site:cg06680369, B=0.36, L=0.58, H=0.54
32800 tcgameth site:cg07471943, B=0.35, L=0.56, H=0.53
32800 tcgameth site:cg10746542, B=0.19, L=0.3, H=0.31
32800 tcgameth site:cg23248887, B=0.25, L=0.7, H=0.61
32800 tcgaexp gene=SSTR1, entrez=6751, pos=chr14:38677204-38682268(+), B=300, L=710, M=910, H=3003