DMR 32812 chr14:51338901-51339050 (150bp)
| DMR Stats | |
|---|---|
| Position | chr14:51338901-51339050 (View on UCSC) |
| Width | 150bp |
| Genomic Context | promoter |
| Nearest Genes | ABHD12B (0bp away) |
| ANODEV p-value | 0.017943451656 |
| Frequencies | Benign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 6.0 (66.67 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32812 | ABHD12B | 8225 | uc001wyq.3 | chr14 | 51338878 | 51371688 | + | 150 | 100.0 | 0.43 | 0 | 100.0 | E1 (64), I1 (36.67), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0) | 0.0 |
| 32812 | ABHD12B | 8225 | uc001wyr.3 | chr14 | 51338878 | 51371688 | + | 150 | 100.0 | 0.72 | 0 | 100.0 | E1 (64), I1 (36.67), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0) | 0.0 |
| 32812 | ABHD12B | 8225 | uc001wys.3 | chr14 | 51338878 | 51371688 | + | 150 | 100.0 | 0.43 | 0 | 100.0 | E1 (64), I1 (36.67), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0) | 0.0 |
| 32812 | ABHD12B | 8225 | uc010any.3 | chr14 | 51338878 | 51371688 | + | 150 | 100.0 | 0.43 | 1 | 100.0 | E1 (64), I1 (36.67), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0) | 0.0 |
- 4 geness
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 32812 | chr14 | 51338561 | 51339115 | wgEncodeRegDnaseClusteredV2 | 34 | score:510, srow:353007 |
| 32812 | chr14 | 51338418 | 51339870 | wgEncodeRegTfbsClusteredV3 | EZH2 | score:427, expCount:6, expNums:6,15,19,36,38,40, expScores:282,245,222,305,316,272, srow:1207369 |
| 32812 | chr14 | 51338572 | 51339241 | wgEncodeRegTfbsClusteredV3 | RBBP5 | score:279, expCount:1, expNums:8, expScores:279, srow:1207370 |
| 32812 | chr14 | 51338695 | 51338974 | wgEncodeRegTfbsClusteredV3 | PAX5 | score:129, expCount:1, expNums:129, expScores:129, srow:1207371 |
| 32812 | chr14 | 51338875 | 51339250 | wgEncodeRegTfbsClusteredV3 | TBP | score:206, expCount:1, expNums:359, expScores:206, srow:1207372 |
| 32812 | chr14 | 51338956 | 51338979 | tfbsConsSites | V$BRACH_01 | score:687, zScore:1.84, srow:1548655 |
| 32812 | chr14 | 51338959 | 51338963 | phastConsElements100way | lod=16 | score:268, srow:2684312 |
| 32812 | chr14 | 51338968 | 51338981 | phastConsElements100way | lod=70 | score:414, srow:2684313 |
| 32812 | chr14 | 51338987 | 51339003 | phastConsElements100way | lod=65 | score:407, srow:2684314 |
| 32812 | chr14 | 51338713 | 51339146 | cpgIsland | CpG: 61 | length:434, cpgNum:61, gcNum:341, perCpg:28.1, perGc:78.6, obsExp:0.91, srow:7012 |
- 10 featuress
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 32812 | cellmeth_recounts | PrEC: 3, LNCaP: 1254, DU145: 6 |  |
| 32812 | cellmeth_diffreps_PrECvsLNCaP | A=6, B=1561, Length=840, Event=Up, log2FC=8.02, padj=0 |  |
| 32812 | cellmeth_diffreps_LNCaPvsDU145 | A=1666.64, B=36.48, Length=800, Event=Down, log2FC=-5.51, padj=0 |  |
| 32812 | cellexp | id=ENSG00000100504, name=PYGL, PrEC=19211, str=25902, LNCaP=490, str=975, DU145=23730, str=29976 |  |
| 32812 | cellexp | id=ENSG00000131969, name=ABHD12B, PrEC=72, str=107, LNCaP=2, str=0, DU145=132, str=222 |  |
| 32812 | tcgaexp | gene=ABHD12B, entrez=145447, pos=chr14:51338878-51371688(+), B=4, L=1, M=1, H=2 |  |