DMR 331 chr1:77996901-77997100 (200bp)

DMR Stats
Positionchr1:77996901-77997100 (View on UCSC)
Width200bp
Genomic Contextintron
Nearest GenesAK5 (0bp away)
ANODEV p-value0.00181115301399
FrequenciesBenign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 0.0 (0.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
331 AK5 1059 uc001dhn.3 chr1 77747662 78025654 + 200 100.0 0.61 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (100), E13 (0), I13 (0), E14 (0) 0.0
331 AK5 1059 uc001dho.3 chr1 77748287 78025654 + 200 100.0 0.61 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (100), E13 (0), I13 (0), E14 (0) 0.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
331 chr1 77996926 77997305 wgEncodeRegTfbsClusteredV3 NFYB score:478, expCount:2, expNums:302,517, expScores:204,478, srow:175580
  • 1 features

Omics Overlaps

Dmrid Omic Set Data Plot
331 cellmeth_recounts PrEC: 2, LNCaP: 5, DU145: 3
331 cellmeth_diffreps_PrECvsLNCaP A=40, B=7, Length=360, Event=Down, log2FC=-2.51, padj=2.24678261091633e-05
331 cellmeth_diffreps_PrECvsDU145 A=40, B=5, Length=400, Event=Down, log2FC=-3, padj=2.14367948062371e-06
331 cellexp id=ENSG00000154027, name=AK5, PrEC=26, str=48, LNCaP=22, str=75, DU145=6, str=1
331 tcgaexp gene=AK5, entrez=26289, pos=chr1:77747662-78025654(+), B=169, L=417, M=508, H=671
331 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305