DMR 33392 chr15:90039351-90039950 (600bp)

DMR Stats
Positionchr15:90039351-90039950 (View on UCSC)
Width600bp
Genomic Contextpromoter
Nearest GenesRHCG (0bp away)
ANODEV p-value4.89087018982e-09
FrequenciesBenign: 0.0 (0.0%), Low: 5.0 (83.33%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
33392 RHCG 10253 uc002bnz.2 chr15 90014638 90039799 - 449 74.83 1.9 0 100.0 E1 (34.67), I1 (40.17), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0) 0.0
33392 RHCG 10253 uc002boa.2 chr15 90014638 90039799 - 449 74.83 1.42 1 100.0 E1 (34.67), I1 (40.17), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0) 0.0
33392 RHCG 10253 uc010bnq.1 chr15 90020959 90039799 - 449 74.83 1.84 0 100.0 E1 (34.67), I1 (40.17), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0) 0.0
  • 3 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
33392 chr15 90039466 90039755 wgEncodeRegDnaseClusteredV2 73 score:779, srow:420141
33392 chr15 90039806 90040275 wgEncodeRegDnaseClusteredV2 25 score:522, srow:420142
33392 chr15 90039268 90040376 wgEncodeRegTfbsClusteredV3 EZH2 score:544, expCount:4, expNums:21,36,38,43, expScores:429,222,348,529, srow:1419545
33392 chr15 90039346 90039945 wgEncodeRegTfbsClusteredV3 CTBP2 score:146, expCount:1, expNums:348, expScores:146, srow:1419546
33392 chr15 90039356 90039935 wgEncodeRegTfbsClusteredV3 ATF2 score:262, expCount:1, expNums:134, expScores:262, srow:1419547
33392 chr15 90039393 90039828 wgEncodeRegTfbsClusteredV3 UBTF score:157, expCount:1, expNums:549, expScores:157, srow:1419548
33392 chr15 90039398 90039833 wgEncodeRegTfbsClusteredV3 CTCF score:1000, expCount:85, expNums:2,5,12,16,18,20,24,37,39,42,44,48,49,137,174,213,267,290,463,493,595,597,601,603,604,605,606,607,609,615,618,621,627,628,629,630,631,635,636,638,639,640,641,642,643,644,645,646,647,648,650,651,652,653,654,655,656,657,658,659,660,661,662,664,665,667,668,669,671,672,673,674,675,676,677,678,679,680,681,682,683,684,685,686,687, expScores:184,1000,555,221,238,274,679,181,381,186,313,956,958,1000,1000,1000,698,535,191,985,1000,133,390,591,400,773,224,175,555,165,212,578,1000,1000,1000,1000,1000,541,312,861,217,196,121,319,163,240,920,369,682,121,288,316,337,483,202,217,270,139,272,835,212,825,1000,637,123,539,149,352,198,275,696,443,338,819,528,206,467,1000,116,293,298,101,564,890,319, srow:1419549
33392 chr15 90039445 90039734 wgEncodeRegTfbsClusteredV3 ZNF143 score:266, expCount:1, expNums:361, expScores:266, srow:1419550
33392 chr15 90039478 90039747 wgEncodeRegTfbsClusteredV3 RAD21 score:699, expCount:6, expNums:149,193,231,280,355,448, expScores:699,429,235,315,480,188, srow:1419551
33392 chr15 90039487 90040096 wgEncodeRegTfbsClusteredV3 SP4 score:224, expCount:1, expNums:155, expScores:224, srow:1419552
33392 chr15 90039492 90040034 wgEncodeRegTfbsClusteredV3 MYC score:364, expCount:2, expNums:624,626, expScores:303,364, srow:1419553
33392 chr15 90039504 90039673 wgEncodeRegTfbsClusteredV3 CTCFL score:104, expCount:1, expNums:214, expScores:104, srow:1419554
33392 chr15 90039509 90039778 wgEncodeRegTfbsClusteredV3 SMC3 score:139, expCount:1, expNums:450, expScores:139, srow:1419555
33392 chr15 90039514 90039849 wgEncodeRegTfbsClusteredV3 YY1 score:196, expCount:1, expNums:162, expScores:196, srow:1419556
33392 chr15 90039532 90039942 wgEncodeRegTfbsClusteredV3 POLR2A score:1000, expCount:5, expNums:61,62,146,596,632, expScores:1000,631,255,358,651, srow:1419557
33392 chr15 90039548 90040067 wgEncodeRegTfbsClusteredV3 SIN3A score:195, expCount:1, expNums:357, expScores:195, srow:1419558
33392 chr15 90039561 90039936 wgEncodeRegTfbsClusteredV3 TBP score:247, expCount:1, expNums:359, expScores:247, srow:1419559
33392 chr15 90039566 90039845 wgEncodeRegTfbsClusteredV3 CREB1 score:144, expCount:1, expNums:47, expScores:144, srow:1419560
33392 chr15 90039568 90039923 wgEncodeRegTfbsClusteredV3 TAF7 score:248, expCount:1, expNums:158, expScores:248, srow:1419561
33392 chr15 90039584 90039833 wgEncodeRegTfbsClusteredV3 TAF1 score:487, expCount:1, expNums:157, expScores:487, srow:1419562
33392 chr15 90039649 90040046 wgEncodeRegTfbsClusteredV3 MAX score:509, expCount:2, expNums:278,511, expScores:509,146, srow:1419563
33392 chr15 90039731 90040009 wgEncodeRegTfbsClusteredV3 USF2 score:567, expCount:2, expNums:319,360, expScores:175,567, srow:1419564
33392 chr15 90039744 90040035 wgEncodeRegTfbsClusteredV3 USF1 score:913, expCount:7, expNums:67,68,69,161,202,243,265, expScores:344,553,715,913,216,149,196, srow:1419565
33392 chr15 90039654 90039668 tfbsConsSites V$CDPCR3_01 score:818, zScore:2.33, srow:1832658
33392 chr15 90039709 90039728 tfbsConsSites V$ARNT_02 score:783, zScore:1.84, srow:1832659
  • Page 1 of 3
  • 25 of 65 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
33392 cellmeth_recounts PrEC: 5, LNCaP: 98, DU145: 1
33392 cellmeth_diffreps_PrECvsLNCaP A=7, B=76, Length=640, Event=Up, log2FC=3.44, padj=2.67853354721823e-14
33392 cellmeth_diffreps_LNCaPvsDU145 A=83.39, B=0.94, Length=680, Event=Down, log2FC=-6.48, padj=0
33392 cellexp id=ENSG00000140519, name=RHCG, PrEC=2684, str=4951, LNCaP=2, str=5, DU145=65, str=79
33392 tcgameth site:cg02805106, B=0.25, L=0.48, H=0.46
33392 tcgameth site:cg10453365, B=0.33, L=0.62, H=0.6
33392 tcgameth site:cg12042113, B=0.23, L=0.56, H=0.54
33392 tcgameth site:cg18726691, B=0.23, L=0.67, H=0.63
33392 tcgameth site:cg24653181, B=0.26, L=0.57, H=0.56
33392 tcgaexp gene=RHCG, entrez=51458, pos=chr15:90014638-90039799(-), B=271, L=58, M=75, H=40