DMR 33409 chr15:93632701-93633250 (550bp)

DMR Stats
Positionchr15:93632701-93633250 (View on UCSC)
Width550bp
Genomic Contextpromoter
Nearest GenesRGMA (257bp away)
ANODEV p-value3.41115987686e-08
FrequenciesBenign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
33409 chr15 93631106 93632915 wgEncodeRegDnaseClusteredV2 118 score:1000, srow:422533
33409 chr15 93632986 93633215 wgEncodeRegDnaseClusteredV2 8 score:371, srow:422534
33409 chr15 93633226 93633675 wgEncodeRegDnaseClusteredV2 17 score:327, srow:422535
33409 chr15 93632515 93633034 wgEncodeRegTfbsClusteredV3 SIN3A score:185, expCount:1, expNums:357, expScores:185, srow:1428954
33409 chr15 93632759 93633598 wgEncodeRegTfbsClusteredV3 EZH2 score:425, expCount:6, expNums:15,19,21,38,40,43, expScores:225,104,337,331,425,425, srow:1428955
33409 chr15 93632736 93632742 tfbsConsSites V$NKX25_01 score:948, zScore:1.73, srow:1841295
33409 chr15 93633027 93633042 tfbsConsSites V$FREAC4_01 score:811, zScore:1.91, srow:1841296
33409 chr15 93633103 93633121 tfbsConsSites V$ER_Q6 score:842, zScore:2.8, srow:1841297
33409 chr15 93632904 93632914 phastConsElements100way lod=26 score:316, srow:3179329
33409 chr15 93631429 93633173 cpgIsland CpG: 161 length:1745, cpgNum:161, gcNum:1044, perCpg:18.5, perGc:59.8, obsExp:1.03, srow:8310
33409 chr15 93633174 93635173 cpgShore — values(x.gr)[overs$srow, ]:15296
  • 11 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
33409 cellmeth_recounts PrEC: 11, LNCaP: 960, DU145: 32
33409 cellmeth_diffreps_PrECvsLNCaP A=18, B=785, Length=1040, Event=Up, log2FC=5.45, padj=0
33409 cellmeth_diffreps_LNCaPvsDU145 A=865.93, B=28.06, Length=1280, Event=Down, log2FC=-4.95, padj=0
33409 tcgameth site:cg02918577, B=0.51, L=0.69, H=0.69
33409 tcgameth site:cg10959198, B=0.34, L=0.71, H=0.69
33409 tcgameth site:cg12595281, B=0.4, L=0.61, H=0.59