DMR 33468 chr16:521251-521400 (150bp)

DMR Stats
Positionchr16:521251-521400 (View on UCSC)
Width150bp
Genomic Contextexon
Nearest GenesRAB11FIP3 (0bp away)
ANODEV p-value0.000495567267272
FrequenciesBenign: 2.0 (28.57%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
33468 RAB11FIP3 10676 uc002chf.3 chr16 475668 572481 + 150 100.0 4.56 0 0.0 E1 (0), I1 (0), E2 (0), I2 (29.33), E3 (63.33), I3 (8), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
33468 chr16 521146 522090 wgEncodeRegDnaseClusteredV2 60 score:1000, srow:427496
33468 chr16 521393 521676 wgEncodeRegTfbsClusteredV3 POLR2A score:125, expCount:1, expNums:599, expScores:125, srow:1442889
33468 chr16 521297 521306 tfbsConsSites V$GATA1_01 score:944, zScore:1.8, srow:1868734
33468 chr16 521373 521383 tfbsConsSites V$AP1FJ_Q2 score:927, zScore:2.06, srow:1868735
33468 chr16 521373 521396 tfbsConsSites V$BRACH_01 score:728, zScore:2.69, srow:1868736
33468 chr16 521374 521392 tfbsConsSites V$PAX2_01 score:835, zScore:3.12, srow:1868737
33468 chr16 521390 521396 tfbsConsSites V$NKX25_01 score:948, zScore:1.73, srow:1868738
33468 chr16 521301 521301 cosmic COSM471808 srow:419626
33468 chr16 521368 521368 cosmic COSM971370 srow:419627
33468 chr16 520808 521302 oreganno OREG0003708 id:OREG0003708, srow:8402
33468 chr16 521267 521272 phastConsElements100way lod=13 score:247, srow:3212456
33468 chr16 521292 521295 phastConsElements100way lod=30 score:330, srow:3212457
33468 chr16 521300 521313 phastConsElements100way lod=34 score:343, srow:3212458
33468 chr16 521339 521343 phastConsElements100way lod=30 score:330, srow:3212459
33468 chr16 521351 521396 phastConsElements100way lod=195 score:515, srow:3212460
  • 15 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
33468 cellmeth_recounts PrEC: 0, LNCaP: 9, DU145: 4
33468 cellexp id=ENSG00000090565, name=RAB11FIP3, PrEC=2569, str=2369, LNCaP=4451, str=3043, DU145=2343, str=1681
33468 tcgaexp gene=RAB11FIP3, entrez=9727, pos=chr16:475668-572481(+), B=2997, L=3577, M=3539, H=4104