DMR 33524 chr16:3136851-3137000 (150bp)

DMR Stats
Positionchr16:3136851-3137000 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesZSCAN10 (1894bp away)
ANODEV p-value0.0193593514169
FrequenciesBenign: 1.0 (14.29%), Low: 5.0 (83.33%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
33524 chr16 3136546 3137755 wgEncodeRegDnaseClusteredV2 57 score:1000, srow:430020
33524 chr16 3136776 3137175 wgEncodeRegTfbsClusteredV3 FOS score:435, expCount:1, expNums:457, expScores:435, srow:1454721
33524 chr16 3136779 3137205 wgEncodeRegTfbsClusteredV3 POLR2A score:109, expCount:2, expNums:445,619, expScores:98,109, srow:1454722
33524 chr16 3136799 3137094 wgEncodeRegTfbsClusteredV3 JUN score:126, expCount:1, expNums:458, expScores:126, srow:1454723
33524 chr16 3135034 3137033 cpgShelf — values(x.gr)[overs$srow, ]:13686
  • 5 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
33524 cellmeth_recounts PrEC: 20, LNCaP: 4, DU145: 1
33524 cellmeth_diffreps_PrECvsLNCaP A=30, B=6, Length=360, Event=Down, log2FC=-2.32, padj=0.00110100501978546
33524 cellmeth_diffreps_PrECvsDU145 A=30, B=1, Length=400, Event=Down, log2FC=-4.91, padj=4.59319638008846e-07
33524 cellexp id=ENSG00000262370, name=RP11-473M20.9, PrEC=0, str=0, LNCaP=0, str=0, DU145=0, str=0
33524 tcgameth site:cg08937107, B=0.72, L=0.73, H=0.69