DMR 33542 chr16:3931551-3931900 (350bp)

DMR Stats
Positionchr16:3931551-3931900 (View on UCSC)
Width350bp
Genomic Contextintergenic
Nearest GenesCREBBP (1429bp away)
ANODEV p-value4.19308334668e-08
FrequenciesBenign: 1.0 (14.29%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
33542 chr16 3931006 3931595 wgEncodeRegDnaseClusteredV2 23 score:570, srow:430707
33542 chr16 3931606 3931870 wgEncodeRegDnaseClusteredV2 13 score:278, srow:430708
33542 chr16 3931466 3931789 wgEncodeRegTfbsClusteredV3 BACH1 score:195, expCount:1, expNums:341, expScores:195, srow:1457875
33542 chr16 3931656 3931899 wgEncodeRegTfbsClusteredV3 EGR1 score:207, expCount:1, expNums:216, expScores:207, srow:1457876
33542 chr16 3931749 3931757 tfbsConsSites V$AP1_C score:975, zScore:2.44, srow:1879879
33542 chr16 3931900 3931903 phastConsElements100way lod=12 score:240, srow:3236650
33542 chr16 3930649 3931651 cpgIsland CpG: 101 length:1003, cpgNum:101, gcNum:656, perCpg:20.1, perGc:65.4, obsExp:0.94, srow:8777
33542 chr16 3931652 3933651 cpgShore — values(x.gr)[overs$srow, ]:16042
  • 8 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
33542 cellmeth_recounts PrEC: 28, LNCaP: 595, DU145: 1
33542 cellmeth_diffreps_PrECvsLNCaP A=60, B=632, Length=940, Event=Up, log2FC=3.4, padj=0
33542 cellmeth_diffreps_PrECvsDU145 A=41, B=1, Length=400, Event=Down, log2FC=-5.36, padj=3.57052378930794e-10
33542 cellmeth_diffreps_LNCaPvsDU145 A=683.12, B=10.29, Length=1080, Event=Down, log2FC=-6.05, padj=0
33542 tcgameth site:cg03264209, B=0.51, L=0.63, H=0.6