DMR 33558 chr16:8806501-8807000 (500bp)

DMR Stats
Positionchr16:8806501-8807000 (View on UCSC)
Width500bp
Genomic Contextpromoter
Nearest GenesABAT (0bp away)
ANODEV p-value2.10773639929e-07
FrequenciesBenign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
33558 ABAT 10923 uc002czc.4 chr16 8768444 8878432 + 500 100.0 2.55 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0) 0.0
33558 ABAT 10923 uc002czd.4 chr16 8806826 8878432 + 175 35.0 0.36 0 100.0 E1 (35), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0) 0.0
33558 ABAT 10923 uc010buh.3 chr16 8806826 8878432 + 175 35.0 0.6 0 100.0 E1 (35), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0) 0.0
  • 3 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
33558 chr16 8806601 8807035 wgEncodeRegDnaseClusteredV2 15 score:734, srow:432648
33558 chr16 8806256 8806739 wgEncodeRegTfbsClusteredV3 GATA3 score:293, expCount:1, expNums:587, expScores:293, srow:1464404
33558 chr16 8806491 8806761 wgEncodeRegTfbsClusteredV3 GATA2 score:1000, expCount:1, expNums:586, expScores:1000, srow:1464405
33558 chr16 8806538 8806867 wgEncodeRegTfbsClusteredV3 MAX score:135, expCount:1, expNums:352, expScores:135, srow:1464406
33558 chr16 8806629 8806904 wgEncodeRegTfbsClusteredV3 USF2 score:168, expCount:1, expNums:360, expScores:168, srow:1464407
33558 chr16 8806686 8806812 wgEncodeRegTfbsClusteredV3 USF1 score:556, expCount:2, expNums:161,265, expScores:486,556, srow:1464408
33558 chr16 8806779 8807042 wgEncodeRegTfbsClusteredV3 CEBPB score:206, expCount:1, expNums:343, expScores:206, srow:1464409
33558 chr16 8806875 8807129 wgEncodeRegTfbsClusteredV3 RAD21 score:343, expCount:4, expNums:149,193,264,355, expScores:343,241,169,147, srow:1464410
33558 chr16 8806906 8807142 wgEncodeRegTfbsClusteredV3 CTCF score:273, expCount:5, expNums:174,628,629,630,631, expScores:129,250,273,241,213, srow:1464411
33558 chr16 8806558 8806581 tfbsConsSites V$HTF_01 score:777, zScore:2, srow:1893191
33558 chr16 8806593 8806606 tfbsConsSites V$GATA1_03 score:886, zScore:2.47, srow:1893192
33558 chr16 8806595 8806603 tfbsConsSites V$MSX1_01 score:904, zScore:1.86, srow:1893193
33558 chr16 8806595 8806603 tfbsConsSites V$LMO2COM_02 score:933, zScore:2.38, srow:1893194
33558 chr16 8806606 8806627 tfbsConsSites V$MEF2_03 score:774, zScore:1.69, srow:1893195
33558 chr16 8806609 8806620 tfbsConsSites V$NKX3A_01 score:852, zScore:1.66, srow:1893196
33558 chr16 8806611 8806625 tfbsConsSites V$CDP_02 score:818, zScore:1.75, srow:1893197
33558 chr16 8806619 8806630 tfbsConsSites V$NFAT_Q6 score:951, zScore:2.2, srow:1893198
33558 chr16 8806620 8806627 tfbsConsSites V$STAT4_01 score:1000, zScore:1.65, srow:1893199
33558 chr16 8806645 8806662 tfbsConsSites V$RFX1_02 score:884, zScore:2.85, srow:1893200
33558 chr16 8806663 8806671 tfbsConsSites V$HOXA3_01 score:940, zScore:2.11, srow:1893201
33558 chr16 8806681 8806692 tfbsConsSites V$MEIS1_01 score:942, zScore:2.41, srow:1893202
33558 chr16 8806682 8806692 tfbsConsSites V$TGIF_01 score:897, zScore:1.85, srow:1893203
33558 chr16 8806752 8806769 tfbsConsSites V$RFX1_02 score:890, zScore:2.95, srow:1893204
33558 chr16 8806515 8806519 phastConsElements100way lod=14 score:255, srow:3253835
33558 chr16 8806548 8806558 phastConsElements100way lod=22 score:300, srow:3253836
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  • 25 of 35 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
33558 cellmeth_recounts PrEC: 12, LNCaP: 0, DU145: 5
33558 cellmeth_diffreps_PrECvsLNCaP A=12, B=0, Length=300, Event=Down, log2FC=-Inf, padj=0.00157949948552458
33558 cellexp id=ENSG00000183044, name=ABAT, PrEC=1039, str=1896, LNCaP=2957, str=4501, DU145=276, str=56
33558 tcgameth site:cg00220102, B=0.51, L=0.74, H=0.73
33558 tcgameth site:cg00231389, B=0.32, L=0.56, H=0.56
33558 tcgameth site:cg01881182, B=0.63, L=0.81, H=0.8
33558 tcgameth site:cg08241330, B=0.57, L=0.73, H=0.73
33558 tcgameth site:cg08834902, B=0.56, L=0.72, H=0.72
33558 tcgameth site:cg16586594, B=0.51, L=0.72, H=0.72
33558 tcgameth site:cg26778345, B=0.35, L=0.65, H=0.62
33558 tcgaexp gene=ABAT, entrez=18, pos=chr16:8768444-8878432(+), B=5178, L=7494, M=7026, H=5106