DMR 33605 chr16:16244501-16244700 (200bp)

DMR Stats
Positionchr16:16244501-16244700 (View on UCSC)
Width200bp
Genomic Contextexon
Nearest GenesABCC6 (0bp away)
ANODEV p-value0.0028654939328
FrequenciesBenign: 2.0 (28.57%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
33605 ABCC6 11002 uc002den.4 chr16 16243422 16317328 - 200 100.0 0.29 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0), I17 (0), E18 (0), I18 (0), E19 (0), I19 (0), E20 (0), I20 (0), E21 (0), I21 (0), E22 (0), I22 (0), E23 (0), I23 (0), E24 (0), I24 (0), E25 (0), I25 (0), E26 (0), I26 (0), E27 (0), I27 (0), E28 (0), I28 (0), E29 (0), I29 (36), E30 (64.5), I30 (0), E31 (0) 0.0
33605 ABCC6 11002 uc010bvo.3 chr16 16243422 16317328 - 200 100.0 0.29 1 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0), I17 (0), E18 (0), I18 (0), E19 (0), I19 (0), E20 (0), I20 (0), E21 (0), I21 (0), E22 (0), I22 (0), E23 (0), I23 (0), E24 (0), I24 (0), E25 (0), I25 (0), E26 (0), I26 (0), E27 (0), I27 (36), E28 (64.5), I28 (0), E29 (0) 0.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
33605 chr16 16243661 16244835 wgEncodeRegDnaseClusteredV2 85 score:1000, srow:437218
33605 chr16 16243124 16244908 wgEncodeRegTfbsClusteredV3 POLR2A score:648, expCount:8, expNums:61,62,123,192,249,279,447,616, expScores:648,593,249,248,157,238,311,226, srow:1483571
33605 chr16 16244422 16244737 wgEncodeRegTfbsClusteredV3 GABPA score:195, expCount:1, expNums:180, expScores:195, srow:1483591
33605 chr16 16244572 16244588 tfbsConsSites V$PPARG_03 score:804, zScore:2.25, srow:1904078
33605 chr16 16244574 16244574 cosmic COSM1478554 srow:430163
33605 chr16 16244575 16244575 cosmic COSM1323705 srow:430164
33605 chr16 16244592 16244592 cosmic COSM471370 srow:430165
33605 chr16 16244507 16244511 phastConsElements100way lod=29 score:327, srow:3275643
33605 chr16 16244513 16244523 phastConsElements100way lod=87 score:436, srow:3275644
33605 chr16 16244527 16244529 phastConsElements100way lod=34 score:343, srow:3275645
33605 chr16 16244531 16244535 phastConsElements100way lod=48 score:377, srow:3275646
33605 chr16 16244537 16244544 phastConsElements100way lod=78 score:425, srow:3275647
33605 chr16 16244546 16244547 phastConsElements100way lod=31 score:333, srow:3275648
33605 chr16 16244549 16244550 phastConsElements100way lod=37 score:351, srow:3275649
33605 chr16 16244552 16244559 phastConsElements100way lod=93 score:442, srow:3275650
33605 chr16 16244561 16244565 phastConsElements100way lod=57 score:394, srow:3275651
33605 chr16 16244567 16244589 phastConsElements100way lod=180 score:508, srow:3275652
33605 chr16 16244591 16244595 phastConsElements100way lod=49 score:379, srow:3275653
33605 chr16 16244597 16244598 phastConsElements100way lod=21 score:295, srow:3275654
33605 chr16 16244600 16244627 phastConsElements100way lod=242 score:537, srow:3275655
33605 chr16 16244630 16244633 phastConsElements100way lod=46 score:373, srow:3275656
  • 21 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
33605 cellmeth_recounts PrEC: 5, LNCaP: 16, DU145: 4
33605 cellmeth_diffreps_LNCaPvsDU145 A=13.9, B=0, Length=240, Event=Down, log2FC=-Inf, padj=0.0015589380675887
33605 cellexp id=ENSG00000091262, name=ABCC6, PrEC=25, str=176, LNCaP=184, str=152, DU145=142, str=81
33605 tcgaexp gene=ABCC6, entrez=368, pos=chr16:16243422-16317328(-), B=335, L=134, M=179, H=136