DMR 33639 chr16:25704151-25704700 (550bp)

DMR Stats
Positionchr16:25704151-25704700 (View on UCSC)
Width550bp
Genomic Contextexon
Nearest GenesHS3ST4 (0bp away)
ANODEV p-value2.09101629009e-08
FrequenciesBenign: 0.0 (0.0%), Low: 5.0 (83.33%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
33639 HS3ST4 11157 uc002dof.3 chr16 25703347 26149009 + 550 100.0 17.66 0 0.0 E1 (58.55), I1 (41.64), E2 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
33639 chr16 25702726 25705455 wgEncodeRegDnaseClusteredV2 52 score:1000, srow:441445
33639 chr16 25703756 25705030 wgEncodeRegTfbsClusteredV3 EZH2 score:448, expCount:7, expNums:13,15,19,21,36,40,43, expScores:316,399,122,325,318,448,269, srow:1499679
33639 chr16 25704058 25704387 wgEncodeRegTfbsClusteredV3 CHD2 score:217, expCount:1, expNums:345, expScores:217, srow:1499680
33639 chr16 25704374 25704697 wgEncodeRegTfbsClusteredV3 BACH1 score:155, expCount:1, expNums:341, expScores:155, srow:1499681
33639 chr16 25704157 25704177 tfbsConsSites V$PAX4_01 score:797, zScore:1.64, srow:1925245
33639 chr16 25704166 25704187 tfbsConsSites V$OLF1_01 score:795, zScore:1.69, srow:1925246
33639 chr16 25704265 25704282 tfbsConsSites V$CMYB_01 score:803, zScore:1.93, srow:1925247
33639 chr16 25704315 25704329 tfbsConsSites V$ISRE_01 score:804, zScore:2.09, srow:1925248
33639 chr16 25704363 25704392 tfbsConsSites V$HOX13_01 score:718, zScore:1.91, srow:1925249
33639 chr16 25704383 25704392 tfbsConsSites V$GATA2_01 score:948, zScore:1.86, srow:1925250
33639 chr16 25704396 25704410 tfbsConsSites V$CDPCR3_01 score:807, zScore:2.1, srow:1925251
33639 chr16 25704407 25704420 tfbsConsSites V$P300_01 score:853, zScore:1.87, srow:1925252
33639 chr16 25704416 25704428 tfbsConsSites V$ZID_01 score:853, zScore:1.79, srow:1925253
33639 chr16 25704467 25704479 tfbsConsSites V$AREB6_01 score:890, zScore:1.84, srow:1925254
33639 chr16 25704190 25704190 cosmic COSM1563164 srow:436434
33639 chr16 25704190 25704190 cosmic COSM1563165 srow:436435
33639 chr16 25704220 25704220 cosmic COSM398031 srow:436436
33639 chr16 25704220 25704220 cosmic COSM398032 srow:436437
33639 chr16 25704251 25704251 cosmic COSM969169 srow:436438
33639 chr16 25704251 25704251 cosmic COSM969170 srow:436439
33639 chr16 25704337 25704337 cosmic COSM1209997 srow:436440
33639 chr16 25704337 25704337 cosmic COSM1209998 srow:436441
33639 chr16 25704369 25704370 cosmic COSM359001 srow:436442
33639 chr16 25704369 25704370 cosmic COSM359002 srow:436443
33639 chr16 25704391 25704391 cosmic COSM1210001 srow:436444
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  • 25 of 51 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
33639 cellmeth_recounts PrEC: 0, LNCaP: 1557, DU145: 37
33639 cellmeth_diffreps_PrECvsLNCaP A=1, B=1252, Length=920, Event=Up, log2FC=10.29, padj=0
33639 cellmeth_diffreps_PrECvsDU145 A=0, B=20, Length=380, Event=Up, log2FC=Inf, padj=1.02756470669418e-05
33639 cellmeth_diffreps_LNCaPvsDU145 A=1338.44, B=31.8, Length=900, Event=Down, log2FC=-5.4, padj=0
33639 cellexp id=ENSG00000182601, name=HS3ST4, PrEC=0, str=2, LNCaP=0, str=0, DU145=0, str=0
33639 tcgameth site:cg03376794, B=0.13, L=0.61, H=0.47
33639 tcgameth site:cg05037662, B=0.18, L=0.47, H=0.33
33639 tcgameth site:cg23235241, B=0.12, L=0.62, H=0.49
33639 tcgaexp gene=HS3ST4, entrez=9951, pos=chr16:25703347-26149009(+), B=155, L=221, M=335, H=357