DMR 33705 chr16:54970851-54973100 (2250bp)

DMR Stats
Positionchr16:54970851-54973100 (View on UCSC)
Width2250bp
Genomic Contextintergenic
Nearest GenesIRX5 (2455bp away)
ANODEV p-value2.29192771912e-05
FrequenciesBenign: 0.0 (0.0%), Low: 6.0 (100.0%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
33705 chr16 54969986 54971555 wgEncodeRegDnaseClusteredV2 100 score:1000, srow:449986
33705 chr16 54971581 54973075 wgEncodeRegDnaseClusteredV2 65 score:904, srow:449987
33705 chr16 54969945 54973242 wgEncodeRegTfbsClusteredV3 EZH2 score:738, expCount:5, expNums:6,13,21,36,43, expScores:276,315,598,234,324, srow:1529593
33705 chr16 54970129 54970947 wgEncodeRegTfbsClusteredV3 CHD1 score:431, expCount:1, expNums:4, expScores:369, srow:1529594
33705 chr16 54971145 54971454 wgEncodeRegTfbsClusteredV3 MYC score:149, expCount:1, expNums:560, expScores:149, srow:1529597
33705 chr16 54971171 54971770 wgEncodeRegTfbsClusteredV3 CTBP2 score:158, expCount:1, expNums:348, expScores:158, srow:1529598
33705 chr16 54971266 54971689 wgEncodeRegTfbsClusteredV3 CTCF score:1000, expCount:76, expNums:2,5,9,12,14,16,18,20,35,37,39,42,44,48,49,137,174,267,290,463,595,597,601,603,604,605,607,609,612,615,618,635,636,638,639,640,641,642,643,644,646,648,650,651,652,653,654,655,657,658,659,660,661,662,663,664,666,667,668,669,671,672,673,674,675,676,677,678,681,682,683,684,685,686,688,689, expScores:186,923,362,212,523,432,244,608,398,1000,1000,194,770,205,287,515,263,229,141,191,1000,1000,134,309,445,236,110,599,156,172,365,1000,924,790,1000,225,982,852,1000,772,1000,154,727,137,440,516,533,296,1000,1000,1000,627,1000,946,611,1000,172,227,818,958,1000,805,1000,331,806,1000,660,540,234,1000,1000,108,955,1000,992,193, srow:1529599
33705 chr16 54971289 54971538 wgEncodeRegTfbsClusteredV3 TEAD4 score:259, expCount:1, expNums:160, expScores:259, srow:1529600
33705 chr16 54971346 54971589 wgEncodeRegTfbsClusteredV3 RAD21 score:634, expCount:4, expNums:149,193,280,355, expScores:634,238,140,400, srow:1529601
33705 chr16 54971377 54971596 wgEncodeRegTfbsClusteredV3 ZBTB7A score:175, expCount:1, expNums:205, expScores:175, srow:1529602
33705 chr16 54972106 54972661 wgEncodeRegTfbsClusteredV3 POLR2A score:161, expCount:1, expNums:22, expScores:161, srow:1529603
33705 chr16 54972123 54973380 wgEncodeRegTfbsClusteredV3 SUZ12 score:283, expCount:1, expNums:578, expScores:148, srow:1529604
33705 chr16 54972545 54973144 wgEncodeRegTfbsClusteredV3 CTBP2 score:137, expCount:1, expNums:348, expScores:137, srow:1529605
33705 chr16 54972617 54972929 wgEncodeRegTfbsClusteredV3 CTCF score:298, expCount:5, expNums:597,635,659,664,688, expScores:238,298,137,155,131, srow:1529606
33705 chr16 54970905 54970924 tfbsConsSites V$MYCMAX_03 score:786, zScore:1.77, srow:1967823
33705 chr16 54970907 54970922 tfbsConsSites V$E47_02 score:878, zScore:1.75, srow:1967824
33705 chr16 54970909 54970920 tfbsConsSites V$AREB6_02 score:906, zScore:1.81, srow:1967825
33705 chr16 54970909 54970920 tfbsConsSites V$MYOD_01 score:921, zScore:2.25, srow:1967826
33705 chr16 54971326 54971337 tfbsConsSites V$AREB6_02 score:957, zScore:2.54, srow:1967827
33705 chr16 54971393 54971405 tfbsConsSites V$IRF1_01 score:856, zScore:2.59, srow:1967828
33705 chr16 54971393 54971405 tfbsConsSites V$IRF2_01 score:862, zScore:2.79, srow:1967829
33705 chr16 54971618 54971630 tfbsConsSites V$RORA2_01 score:899, zScore:2.69, srow:1967830
33705 chr16 54972154 54972169 tfbsConsSites V$AHRARNT_01 score:852, zScore:2.1, srow:1967831
33705 chr16 54972288 54972299 tfbsConsSites V$PAX4_03 score:908, zScore:1.71, srow:1967832
33705 chr16 54972334 54972351 tfbsConsSites V$IRF7_01 score:816, zScore:2.03, srow:1967833
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Omics Overlaps

Dmrid Omic Set Data Plot
33705 cellmeth_recounts PrEC: 59, LNCaP: 1478, DU145: 50
33705 cellmeth_diffreps_PrECvsLNCaP A=93, B=1826, Length=3020, Event=Up, log2FC=4.3, padj=0
33705 cellmeth_diffreps_PrECvsDU145 A=301, B=37, Length=1720, Event=Down, log2FC=-3.02, padj=0
33705 cellmeth_diffreps_LNCaPvsDU145 A=1952.08, B=37.42, Length=3020, Event=Down, log2FC=-5.71, padj=0
33705 cellexp id=ENSG00000259711, name=CTD-3032H12.2, PrEC=4, str=2, LNCaP=2, str=2, DU145=0, str=0
33705 cellexp id=ENSG00000259725, name=CTD-3032H12.1, PrEC=4, str=2, LNCaP=0, str=0, DU145=0, str=0
33705 tcgameth site:cg01047631, B=0.25, L=0.5, H=0.43
33705 tcgameth site:cg03426023, B=0.34, L=0.64, H=0.59
33705 tcgameth site:cg04153740, B=0.14, L=0.39, H=0.41
33705 tcgameth site:cg08454455, B=0.28, L=0.54, H=0.49
33705 tcgameth site:cg08529345, B=0.29, L=0.64, H=0.57
33705 tcgameth site:cg10214640, B=0.51, L=0.69, H=0.66
33705 tcgameth site:cg12492345, B=0.13, L=0.38, H=0.4
33705 tcgameth site:cg15916160, B=0.31, L=0.6, H=0.55
33705 tcgameth site:cg26053832, B=0.34, L=0.62, H=0.58
33705 tcgameth site:cg26470798, B=0.3, L=0.61, H=0.54