DMR 33871 chr17:696601-696800 (200bp)

DMR Stats
Positionchr17:696601-696800 (View on UCSC)
Width200bp
Genomic Context3' end
Nearest GenesRNMTL1 (859bp away)
ANODEV p-value0.00011430359106
FrequenciesBenign: 2.0 (28.57%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
33871 chr17 696741 697335 wgEncodeRegDnaseClusteredV2 31 score:635, srow:471421
  • 1 features

Omics Overlaps

Dmrid Omic Set Data Plot
33871 cellmeth_recounts PrEC: 11, LNCaP: 31, DU145: 53
33871 cellmeth_diffreps_PrECvsDU145 A=20, B=56, Length=340, Event=Up, log2FC=1.49, padj=0.00108186959093424
33871 tcgaexp gene=NSF, entrez=4905, pos=chr17:266212-44834828(+), B=3355, L=5678, M=5410, H=5700
33871 tcgaexp gene=PLEKHM1, entrez=9842, pos=chr17:128328-43568146(-), B=1993, L=1631, M=1589, H=1418
33871 tcgaexp gene=LRRC37A, entrez=9884, pos=chr17:415627-44415160(+), B=924, L=896, M=971, H=940
33871 tcgaexp gene=ARL17A, entrez=51326, pos=chr17:195721-44657088(-), B=200, L=195, M=210, H=230
33871 tcgaexp gene=LRRC37A4P, entrez=55073, pos=chr17:197706-43597889(-), B=1015, L=1512, M=1396, H=1450
33871 tcgaexp gene=ARHGAP27, entrez=201176, pos=chr17:86404-43511112(-), B=1570, L=1264, M=1273, H=1486
33871 tcgaexp gene=KANSL1, entrez=284058, pos=chr17:563498-44302740(-), B=3141, L=2594, M=2797, H=3017
33871 tcgaexp gene=LRRC37A2, entrez=474170, pos=chr17:197706-44633014(+), B=351, L=310, M=361, H=377