DMR 33881 chr17:807051-807700 (650bp)

DMR Stats
Positionchr17:807051-807700 (View on UCSC)
Width650bp
Genomic Contextintron
Nearest GenesNXN (0bp away)
ANODEV p-value6.32444760828e-07
FrequenciesBenign: 0.0 (0.0%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
33881 NXN 11889 uc002fsa.3 chr17 702553 882998 - 650 100.0 0.05 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
33881 chr17 806986 807135 wgEncodeRegDnaseClusteredV2 3 score:314, srow:471532
33881 chr17 807146 807770 wgEncodeRegDnaseClusteredV2 71 score:1000, srow:471533
33881 chr17 806718 807719 wgEncodeRegTfbsClusteredV3 POLR2A score:269, expCount:2, expNums:41,563, expScores:153,269, srow:1607290
33881 chr17 807108 807507 wgEncodeRegTfbsClusteredV3 FOS score:527, expCount:5, expNums:457,556,557,558,559, expScores:159,527,455,398,320, srow:1607291
33881 chr17 807229 807538 wgEncodeRegTfbsClusteredV3 MYC score:192, expCount:1, expNums:560, expScores:192, srow:1607292
33881 chr17 807340 807362 tfbsConsSites V$OCT1_04 score:798, zScore:1.78, srow:2057585
33881 chr17 807351 807364 tfbsConsSites V$CHX10_01 score:828, zScore:2.13, srow:2057586
33881 chr17 807379 807393 tfbsConsSites V$SRF_C score:783, zScore:1.66, srow:2057587
33881 chr17 807383 807391 tfbsConsSites V$MSX1_01 score:904, zScore:1.86, srow:2057588
33881 chr17 807695 807700 tfbsConsSites V$AML1_01 score:1000, zScore:1.78, srow:2057589
33881 chr17 807084 807086 phastConsElements100way lod=12 score:240, srow:3520840
33881 chr17 807210 807228 phastConsElements100way lod=58 score:395, srow:3520841
33881 chr17 807264 807282 phastConsElements100way lod=97 score:446, srow:3520842
33881 chr17 807293 807313 phastConsElements100way lod=72 score:417, srow:3520843
33881 chr17 807316 807327 phastConsElements100way lod=90 score:439, srow:3520844
33881 chr17 807337 807370 phastConsElements100way lod=189 score:512, srow:3520845
33881 chr17 807373 807408 phastConsElements100way lod=105 score:454, srow:3520846
33881 chr17 807423 807428 phastConsElements100way lod=18 score:280, srow:3520847
33881 chr17 807607 807611 phastConsElements100way lod=15 score:262, srow:3520848
  • 19 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
33881 cellmeth_recounts PrEC: 0, LNCaP: 6, DU145: 20
33881 cellexp id=ENSG00000167693, name=NXN, PrEC=14170, str=7994, LNCaP=1525, str=1905, DU145=11809, str=9379
33881 tcgameth site:cg04954757, B=0.53, L=0.78, H=0.75
33881 tcgameth site:cg10194536, B=0.34, L=0.64, H=0.61
33881 tcgaexp gene=MAPT, entrez=4137, pos=chr17:762281-44105699(+), B=1933, L=2382, M=2487, H=2583
33881 tcgaexp gene=NSF, entrez=4905, pos=chr17:266212-44834828(+), B=3355, L=5678, M=5410, H=5700
33881 tcgaexp gene=PLEKHM1, entrez=9842, pos=chr17:128328-43568146(-), B=1993, L=1631, M=1589, H=1418
33881 tcgaexp gene=LRRC37A, entrez=9884, pos=chr17:415627-44415160(+), B=924, L=896, M=971, H=940
33881 tcgaexp gene=ARL17A, entrez=51326, pos=chr17:195721-44657088(-), B=200, L=195, M=210, H=230
33881 tcgaexp gene=LRRC37A4P, entrez=55073, pos=chr17:197706-43597889(-), B=1015, L=1512, M=1396, H=1450
33881 tcgaexp gene=NXN, entrez=64359, pos=chr17:702553-882998(-), B=5704, L=5393, M=4923, H=3951
33881 tcgaexp gene=ARHGAP27, entrez=201176, pos=chr17:86404-43511112(-), B=1570, L=1264, M=1273, H=1486
33881 tcgaexp gene=STH, entrez=246744, pos=chr17:790689-44077060(+), B=0, L=0, M=0, H=0
33881 tcgaexp gene=KANSL1, entrez=284058, pos=chr17:563498-44302740(-), B=3141, L=2594, M=2797, H=3017
33881 tcgaexp gene=LRRC37A2, entrez=474170, pos=chr17:197706-44633014(+), B=351, L=310, M=361, H=377