DMR 33900 chr17:1131501-1132200 (700bp)

DMR Stats
Positionchr17:1131501-1132200 (View on UCSC)
Width700bp
Genomic Contextintergenic
Nearest GenesABR (40884bp away)
ANODEV p-value7.36160539934e-10
FrequenciesBenign: 0.0 (0.0%), Low: 2.0 (33.33%), High: 4.0 (44.44 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
33900 chr17 1131161 1132015 wgEncodeRegDnaseClusteredV2 49 score:919, srow:471871
33900 chr17 1132066 1132675 wgEncodeRegDnaseClusteredV2 33 score:803, srow:471872
33900 chr17 1130857 1133712 wgEncodeRegTfbsClusteredV3 EZH2 score:880, expCount:10, expNums:6,13,15,17,19,21,36,38,40,43, expScores:475,329,251,163,252,663,335,455,646,274, srow:1608338
33900 chr17 1131188 1131982 wgEncodeRegTfbsClusteredV3 NFIC score:284, expCount:1, expNums:97, expScores:230, srow:1608342
33900 chr17 1131261 1131780 wgEncodeRegTfbsClusteredV3 ATF2 score:259, expCount:1, expNums:79, expScores:259, srow:1608343
33900 chr17 1131261 1131796 wgEncodeRegTfbsClusteredV3 SIN3A score:216, expCount:1, expNums:312, expScores:216, srow:1608344
33900 chr17 1131340 1132587 wgEncodeRegTfbsClusteredV3 POLR2A score:593, expCount:11, expNums:105,306,307,328,330,332,334,336,338,340,585, expScores:454,433,249,412,306,379,169,593,323,279,400, srow:1608345
33900 chr17 1131353 1131732 wgEncodeRegTfbsClusteredV3 TBP score:163, expCount:1, expNums:317, expScores:163, srow:1608346
33900 chr17 1131364 1132122 wgEncodeRegTfbsClusteredV3 MAX score:301, expCount:2, expNums:296,576, expScores:221,183, srow:1608347
33900 chr17 1131366 1132079 wgEncodeRegTfbsClusteredV3 MXI1 score:385, expCount:1, expNums:298, expScores:339, srow:1608348
33900 chr17 1131367 1131746 wgEncodeRegTfbsClusteredV3 CHD2 score:158, expCount:1, expNums:288, expScores:158, srow:1608349
33900 chr17 1131439 1131714 wgEncodeRegTfbsClusteredV3 USF2 score:135, expCount:1, expNums:319, expScores:135, srow:1608350
33900 chr17 1131457 1131820 wgEncodeRegTfbsClusteredV3 ELF1 score:204, expCount:1, expNums:88, expScores:204, srow:1608351
33900 chr17 1131471 1131814 wgEncodeRegTfbsClusteredV3 YY1 score:229, expCount:1, expNums:119, expScores:229, srow:1608352
33900 chr17 1131483 1131893 wgEncodeRegTfbsClusteredV3 RELA score:1000, expCount:9, expNums:282,300,325,327,329,331,335,337,339, expScores:401,361,1000,329,431,328,533,582,270, srow:1608353
33900 chr17 1131490 1131729 wgEncodeRegTfbsClusteredV3 USF1 score:135, expCount:1, expNums:161, expScores:135, srow:1608354
33900 chr17 1131492 1132600 wgEncodeRegTfbsClusteredV3 SUZ12 score:126, expCount:2, expNums:358,578, expScores:102,126, srow:1608355
33900 chr17 1131530 1131965 wgEncodeRegTfbsClusteredV3 MAZ score:413, expCount:1, expNums:297, expScores:413, srow:1608356
33900 chr17 1131537 1131777 wgEncodeRegTfbsClusteredV3 RUNX3 score:795, expCount:1, expNums:109, expScores:795, srow:1608357
33900 chr17 1131565 1131882 wgEncodeRegTfbsClusteredV3 EBF1 score:238, expCount:2, expNums:86,292, expScores:238,205, srow:1608358
33900 chr17 1131623 1131940 wgEncodeRegTfbsClusteredV3 PAX5 score:219, expCount:2, expNums:100,129, expScores:219,211, srow:1608359
33900 chr17 1131629 1132038 wgEncodeRegTfbsClusteredV3 TBL1XR1 score:188, expCount:1, expNums:316, expScores:188, srow:1608360
33900 chr17 1131689 1132028 wgEncodeRegTfbsClusteredV3 TAF1 score:193, expCount:1, expNums:115, expScores:193, srow:1608361
33900 chr17 1131719 1132048 wgEncodeRegTfbsClusteredV3 BHLHE40 score:536, expCount:1, expNums:284, expScores:536, srow:1608362
33900 chr17 1131862 1131874 tfbsConsSites V$OCT_C score:844, zScore:2.38, srow:2058513
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  • 25 of 42 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
33900 cellmeth_recounts PrEC: 11, LNCaP: 1246, DU145: 10
33900 cellmeth_diffreps_PrECvsLNCaP A=26, B=1341, Length=1680, Event=Up, log2FC=5.69, padj=0
33900 cellmeth_diffreps_LNCaPvsDU145 A=1436.8, B=17.77, Length=1760, Event=Down, log2FC=-6.34, padj=0
33900 cellexp id=ENSG00000159842, name=ABR, PrEC=5958, str=5449, LNCaP=7075, str=4383, DU145=7236, str=5886
33900 tcgameth site:cg11424456, B=0.11, L=0.57, H=0.5
33900 tcgameth site:cg18331855, B=0.21, L=0.69, H=0.66
33900 tcgaexp gene=CRHR1, entrez=1394, pos=chr17:954315-43913194(+), B=36, L=21, M=25, H=18
33900 tcgaexp gene=MAPT, entrez=4137, pos=chr17:762281-44105699(+), B=1933, L=2382, M=2487, H=2583
33900 tcgaexp gene=NSF, entrez=4905, pos=chr17:266212-44834828(+), B=3355, L=5678, M=5410, H=5700
33900 tcgaexp gene=PLEKHM1, entrez=9842, pos=chr17:128328-43568146(-), B=1993, L=1631, M=1589, H=1418
33900 tcgaexp gene=LRRC37A, entrez=9884, pos=chr17:415627-44415160(+), B=924, L=896, M=971, H=940
33900 tcgaexp gene=ARL17A, entrez=51326, pos=chr17:195721-44657088(-), B=200, L=195, M=210, H=230
33900 tcgaexp gene=LRRC37A4P, entrez=55073, pos=chr17:197706-43597889(-), B=1015, L=1512, M=1396, H=1450
33900 tcgaexp gene=SPPL2C, entrez=162540, pos=chr17:943102-43924438(+), B=0, L=0, M=0, H=0
33900 tcgaexp gene=ARHGAP27, entrez=201176, pos=chr17:86404-43511112(-), B=1570, L=1264, M=1273, H=1486
33900 tcgaexp gene=STH, entrez=246744, pos=chr17:790689-44077060(+), B=0, L=0, M=0, H=0
33900 tcgaexp gene=KANSL1, entrez=284058, pos=chr17:563498-44302740(-), B=3141, L=2594, M=2797, H=3017
33900 tcgaexp gene=LRRC37A2, entrez=474170, pos=chr17:197706-44633014(+), B=351, L=310, M=361, H=377
33900 tcgaexp gene=MAPT-AS1, entrez=100128977, pos=chr17:894694-43972879(-), B=1, L=2, M=4, H=2
33900 tcgaexp gene=MAPT-IT1, entrez=100130148, pos=chr17:891434-43976164(+), B=5, L=3, M=3, H=4