DMR 34110 chr17:27892901-27893600 (700bp)

DMR Stats
Positionchr17:27892901-27893600 (View on UCSC)
Width700bp
Genomic Contextpromoter
Nearest GenesABHD15 (0bp away)
ANODEV p-value0.000242374832034
FrequenciesBenign: 2.0 (28.57%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
34110 ABHD15 12501 uc002hed.2 chr17 27887689 27894042 - 700 100.0 0.86 0 8.29 E1 (71), I1 (29), E2 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
34110 chr17 27892661 27893395 wgEncodeRegDnaseClusteredV2 63 score:1000, srow:487256
34110 chr17 27893406 27893875 wgEncodeRegDnaseClusteredV2 62 score:1000, srow:487257
34110 chr17 27892832 27893121 wgEncodeRegTfbsClusteredV3 HNF4G score:133, expCount:1, expNums:183, expScores:133, srow:1662295
34110 chr17 27892869 27893324 wgEncodeRegTfbsClusteredV3 GTF2F1 score:141, expCount:1, expNums:389, expScores:141, srow:1662296
34110 chr17 27892891 27893300 wgEncodeRegTfbsClusteredV3 FOSL2 score:224, expCount:1, expNums:52, expScores:224, srow:1662297
34110 chr17 27892900 27893537 wgEncodeRegTfbsClusteredV3 CTCF score:976, expCount:58, expNums:0,2,5,9,20,37,44,48,49,137,174,262,290,595,601,603,604,605,606,607,609,612,628,629,630,631,635,638,639,640,643,645,647,648,650,651,652,653,654,655,656,658,659,661,662,663,665,666,672,674,675,676,677,681,685,686,687,688, expScores:512,204,212,368,161,214,136,201,136,168,206,117,275,976,193,256,337,136,126,305,135,260,196,203,154,190,202,386,213,220,136,139,200,147,232,152,189,262,112,101,163,162,312,148,150,262,167,265,125,130,179,176,257,234,229,239,156,188, srow:1662298
34110 chr17 27892905 27893480 wgEncodeRegTfbsClusteredV3 TCF12 score:269, expCount:1, expNums:66, expScores:269, srow:1662299
34110 chr17 27892915 27894043 wgEncodeRegTfbsClusteredV3 EZH2 score:432, expCount:1, expNums:6, expScores:337, srow:1662300
34110 chr17 27892947 27893522 wgEncodeRegTfbsClusteredV3 BCL3 score:273, expCount:1, expNums:46, expScores:273, srow:1662301
34110 chr17 27892953 27893296 wgEncodeRegTfbsClusteredV3 YY1 score:157, expCount:1, expNums:119, expScores:157, srow:1662302
34110 chr17 27892961 27893480 wgEncodeRegTfbsClusteredV3 ETS1 score:313, expCount:1, expNums:51, expScores:313, srow:1662303
34110 chr17 27892997 27893352 wgEncodeRegTfbsClusteredV3 TAF7 score:210, expCount:1, expNums:158, expScores:210, srow:1662304
34110 chr17 27893007 27893664 wgEncodeRegTfbsClusteredV3 GABPA score:331, expCount:4, expNums:54,140,166,180, expScores:331,200,150,222, srow:1662305
34110 chr17 27893012 27893407 wgEncodeRegTfbsClusteredV3 MAX score:150, expCount:1, expNums:395, expScores:150, srow:1662306
34110 chr17 27893012 27893531 wgEncodeRegTfbsClusteredV3 SIN3A score:201, expCount:1, expNums:357, expScores:201, srow:1662307
34110 chr17 27893033 27893248 wgEncodeRegTfbsClusteredV3 POU5F1 score:113, expCount:1, expNums:148, expScores:113, srow:1662308
34110 chr17 27893064 27893439 wgEncodeRegTfbsClusteredV3 TBP score:267, expCount:1, expNums:359, expScores:267, srow:1662309
34110 chr17 27893084 27893561 wgEncodeRegTfbsClusteredV3 POLR2A score:481, expCount:4, expNums:61,62,585,596, expScores:324,319,323,279, srow:1662310
34110 chr17 27893106 27893429 wgEncodeRegTfbsClusteredV3 ZEB1 score:137, expCount:1, expNums:121, expScores:137, srow:1662311
34110 chr17 27893110 27893613 wgEncodeRegTfbsClusteredV3 REST score:259, expCount:1, expNums:59, expScores:259, srow:1662312
34110 chr17 27893155 27893518 wgEncodeRegTfbsClusteredV3 ELF1 score:332, expCount:1, expNums:88, expScores:332, srow:1662313
34110 chr17 27893202 27893481 wgEncodeRegTfbsClusteredV3 CREB1 score:157, expCount:1, expNums:47, expScores:157, srow:1662314
34110 chr17 27893229 27893412 wgEncodeRegTfbsClusteredV3 RUNX3 score:486, expCount:1, expNums:109, expScores:486, srow:1662315
34110 chr17 27893303 27893962 wgEncodeRegTfbsClusteredV3 SMARCB1 score:237, expCount:1, expNums:391, expScores:237, srow:1662316
34110 chr17 27893322 27893545 wgEncodeRegTfbsClusteredV3 SRF score:190, expCount:1, expNums:113, expScores:190, srow:1662317
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  • 25 of 88 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
34110 cellmeth_recounts PrEC: 90, LNCaP: 1780, DU145: 0
34110 cellmeth_diffreps_PrECvsLNCaP A=134, B=1782, Length=1400, Event=Up, log2FC=3.73, padj=0
34110 cellmeth_diffreps_PrECvsDU145 A=133, B=0, Length=700, Event=Down, log2FC=-Inf, padj=0
34110 cellmeth_diffreps_LNCaPvsDU145 A=1905.04, B=0.94, Length=1380, Event=Down, log2FC=-10.99, padj=0
34110 cellexp id=ENSG00000167543, name=TP53I13, PrEC=1666, str=1928, LNCaP=2080, str=805, DU145=2005, str=1608
34110 cellexp id=ENSG00000168792, name=ABHD15, PrEC=672, str=1303, LNCaP=442, str=511, DU145=1346, str=1502
34110 cellexp id=ENSG00000264031, name=RP11-68I3.2, PrEC=0, str=0, LNCaP=0, str=0, DU145=0, str=0
34110 tcgameth site:cg04528771, B=0.45, L=0.62, H=0.59
34110 tcgameth site:cg23112192, B=0.39, L=0.61, H=0.56
34110 tcgameth site:cg23473955, B=0.39, L=0.7, H=0.64
34110 tcgaexp gene=CRHR1, entrez=1394, pos=chr17:954315-43913194(+), B=36, L=21, M=25, H=18
34110 tcgaexp gene=MAPT, entrez=4137, pos=chr17:762281-44105699(+), B=1933, L=2382, M=2487, H=2583
34110 tcgaexp gene=NSF, entrez=4905, pos=chr17:266212-44834828(+), B=3355, L=5678, M=5410, H=5700
34110 tcgaexp gene=PLEKHM1, entrez=9842, pos=chr17:128328-43568146(-), B=1993, L=1631, M=1589, H=1418
34110 tcgaexp gene=LRRC37A, entrez=9884, pos=chr17:415627-44415160(+), B=924, L=896, M=971, H=940
34110 tcgaexp gene=ARL17A, entrez=51326, pos=chr17:195721-44657088(-), B=200, L=195, M=210, H=230
34110 tcgaexp gene=LRRC37A4P, entrez=55073, pos=chr17:197706-43597889(-), B=1015, L=1512, M=1396, H=1450
34110 tcgaexp gene=ABHD15, entrez=116236, pos=chr17:27887689-27894042(-), B=696, L=582, M=589, H=604
34110 tcgaexp gene=CRHR1-IT1, entrez=147081, pos=chr17:1143726-43723595(+), B=197, L=211, M=215, H=223
34110 tcgaexp gene=SPPL2C, entrez=162540, pos=chr17:943102-43924438(+), B=0, L=0, M=0, H=0
34110 tcgaexp gene=ARHGAP27, entrez=201176, pos=chr17:86404-43511112(-), B=1570, L=1264, M=1273, H=1486
34110 tcgaexp gene=STH, entrez=246744, pos=chr17:790689-44077060(+), B=0, L=0, M=0, H=0
34110 tcgaexp gene=KANSL1, entrez=284058, pos=chr17:563498-44302740(-), B=3141, L=2594, M=2797, H=3017
34110 tcgaexp gene=MGC57346, entrez=401884, pos=chr17:1151952-43715329(+), B=601, L=581, M=566, H=598
34110 tcgaexp gene=LRRC37A2, entrez=474170, pos=chr17:197706-44633014(+), B=351, L=310, M=361, H=377
34110 tcgaexp gene=LOC644172, entrez=644172, pos=chr17:1188439-43679748(-), B=84, L=82, M=93, H=90
34110 tcgaexp gene=MAPT-AS1, entrez=100128977, pos=chr17:894694-43972879(-), B=1, L=2, M=4, H=2
34110 tcgaexp gene=MAPT-IT1, entrez=100130148, pos=chr17:891434-43976164(+), B=5, L=3, M=3, H=4