DMR 34823 chr19:566351-567000 (650bp)

DMR Stats
Positionchr19:566351-567000 (View on UCSC)
Width650bp
Genomic Contextintergenic
Nearest GenesBSG (4276bp away)
ANODEV p-value0.0011006113741
FrequenciesBenign: 2.0 (28.57%), Low: 6.0 (100.0%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
34823 chr19 566481 566715 wgEncodeRegDnaseClusteredV2 41 score:1000, srow:555891
34823 chr19 566881 567110 wgEncodeRegDnaseClusteredV2 2 score:246, srow:555892
34823 chr19 566207 566830 wgEncodeRegTfbsClusteredV3 PHF8 score:248, expCount:1, expNums:30, expScores:248, srow:1908266
34823 chr19 566293 566868 wgEncodeRegTfbsClusteredV3 KDM5B score:213, expCount:1, expNums:31, expScores:213, srow:1908267
34823 chr19 566312 566916 wgEncodeRegTfbsClusteredV3 POLR2A score:485, expCount:9, expNums:228,229,256,520,521,522,523,525,622, expScores:219,485,158,188,181,316,212,225,194, srow:1908268
34823 chr19 566352 566780 wgEncodeRegTfbsClusteredV3 MYC score:260, expCount:3, expNums:487,488,575, expScores:260,200,215, srow:1908269
34823 chr19 566384 566899 wgEncodeRegTfbsClusteredV3 PML score:324, expCount:1, expNums:227, expScores:324, srow:1908270
34823 chr19 566397 566730 wgEncodeRegTfbsClusteredV3 BHLHE40 score:491, expCount:2, expNums:423,472, expScores:183,491, srow:1908271
34823 chr19 566418 566713 wgEncodeRegTfbsClusteredV3 FOXP2 score:116, expCount:1, expNums:255, expScores:116, srow:1908272
34823 chr19 566421 566756 wgEncodeRegTfbsClusteredV3 SP1 score:119, expCount:1, expNums:196, expScores:119, srow:1908273
34823 chr19 566422 566761 wgEncodeRegTfbsClusteredV3 HDAC2 score:235, expCount:1, expNums:181, expScores:235, srow:1908274
34823 chr19 566422 566807 wgEncodeRegTfbsClusteredV3 MAX score:379, expCount:3, expNums:223,511,576, expScores:379,222,280, srow:1908275
34823 chr19 566426 566825 wgEncodeRegTfbsClusteredV3 NR2F2 score:277, expCount:1, expNums:225, expScores:277, srow:1908276
34823 chr19 566427 566826 wgEncodeRegTfbsClusteredV3 TAF1 score:156, expCount:1, expNums:238, expScores:156, srow:1908277
34823 chr19 566432 566847 wgEncodeRegTfbsClusteredV3 TRIM28 score:206, expCount:1, expNums:242, expScores:206, srow:1908278
34823 chr19 566433 566700 wgEncodeRegTfbsClusteredV3 CEBPB score:1000, expCount:6, expNums:172,212,378,425,426,477, expScores:416,1000,184,554,1000,1000, srow:1908279
34823 chr19 566436 566811 wgEncodeRegTfbsClusteredV3 TBP score:221, expCount:1, expNums:545, expScores:221, srow:1908280
34823 chr19 566439 566894 wgEncodeRegTfbsClusteredV3 CCNT2 score:133, expCount:1, expNums:476, expScores:133, srow:1908281
34823 chr19 566442 566801 wgEncodeRegTfbsClusteredV3 IRF1 score:161, expCount:1, expNums:506, expScores:161, srow:1908282
34823 chr19 566449 566724 wgEncodeRegTfbsClusteredV3 CEBPD score:243, expCount:1, expNums:173, expScores:243, srow:1908283
34823 chr19 566478 566847 wgEncodeRegTfbsClusteredV3 MAZ score:473, expCount:1, expNums:512, expScores:473, srow:1908284
34823 chr19 566479 566814 wgEncodeRegTfbsClusteredV3 TBL1XR1 score:332, expCount:1, expNums:544, expScores:332, srow:1908285
34823 chr19 566479 566754 wgEncodeRegTfbsClusteredV3 TAL1 score:208, expCount:1, expNums:542, expScores:208, srow:1908286
34823 chr19 566481 566811 wgEncodeRegTfbsClusteredV3 EP300 score:335, expCount:2, expNums:190,519, expScores:335,252, srow:1908287
34823 chr19 566485 566894 wgEncodeRegTfbsClusteredV3 GATA2 score:535, expCount:3, expNums:221,498,586, expScores:181,224,535, srow:1908288
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Omics Overlaps

Dmrid Omic Set Data Plot
34823 cellmeth_recounts PrEC: 17, LNCaP: 58, DU145: 0
34823 cellmeth_diffreps_PrECvsDU145 A=11, B=0, Length=240, Event=Down, log2FC=-Inf, padj=0.00313959514768542
34823 cellmeth_diffreps_PrECvsDU145 A=17, B=0, Length=360, Event=Down, log2FC=-Inf, padj=7.41301388411866e-05
34823 cellmeth_diffreps_LNCaPvsDU145 A=51.31, B=0, Length=840, Event=Down, log2FC=-Inf, padj=0