DMR 34959 chr19:9899851-9900000 (150bp)

DMR Stats
Positionchr19:9899851-9900000 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesZNF846 (20440bp away)
ANODEV p-value0.000454415441278
FrequenciesBenign: 2.0 (28.57%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
34959 chr19 9899766 9899990 wgEncodeRegDnaseClusteredV2 3 score:214, srow:563510
34959 chr19 9899728 9900051 wgEncodeRegTfbsClusteredV3 E2F6 score:160, expCount:1, expNums:215, expScores:160, srow:1949571
34959 chr19 9899766 9900169 wgEncodeRegTfbsClusteredV3 ZBTB7A score:173, expCount:1, expNums:247, expScores:173, srow:1949572
34959 chr19 9899787 9900030 wgEncodeRegTfbsClusteredV3 EGR1 score:294, expCount:1, expNums:216, expScores:294, srow:1949573
34959 chr19 9899844 9900072 phastConsElements100way lod=21 score:295, srow:4165448
34959 chr19 9898995 9900869 cpgShelf — values(x.gr)[overs$srow, ]:19429
  • 6 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
34959 cellmeth_recounts PrEC: 3, LNCaP: 0, DU145: 3
34959 cellexp id=ENSG00000196605, name=ZNF846, PrEC=179, str=579, LNCaP=203, str=143, DU145=147, str=126