DMR 34981 chr19:11689301-11690000 (700bp)

DMR Stats
Positionchr19:11689301-11690000 (View on UCSC)
Width700bp
Genomic Contextpromoter
Nearest GenesACP5 (0bp away)
ANODEV p-value1.11009099148e-05
FrequenciesBenign: 0.0 (0.0%), Low: 5.0 (83.33%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
34981 ACP5 14492 uc002msh.4 chr19 11685475 11689592 - 292 41.71 0.09 0 100.0 E1 (27.57), I1 (14.14), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) 0.0
34981 ACP5 14492 uc002msi.4 chr19 11685475 11689801 - 501 71.57 0.07 0 99.86 E1 (20.43), I1 (26.71), E2 (10.43), I2 (14.14), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0) 0.0
34981 ACP5 14492 uc002msj.4 chr19 11685475 11689801 - 501 71.57 0.05 0 99.86 E1 (20.43), I1 (51.14), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) 0.0
34981 ACP5 14492 uc010dye.1 chr19 11687415 11689801 - 501 71.57 0.05 0 99.86 E1 (20.43), I1 (26.71), E2 (10.43), I2 (14.14), E3 (0), I3 (0), E4 (0) 0.0
  • 4 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
34981 chr19 11689126 11689915 wgEncodeRegDnaseClusteredV2 57 score:1000, srow:565078
34981 chr19 11688837 11689316 wgEncodeRegTfbsClusteredV3 ZNF263 score:214, expCount:1, expNums:553, expScores:214, srow:1958713
34981 chr19 11688935 11689423 wgEncodeRegTfbsClusteredV3 E2F6 score:367, expCount:1, expNums:495, expScores:165, srow:1958715
34981 chr19 11688968 11689327 wgEncodeRegTfbsClusteredV3 IRF1 score:105, expCount:1, expNums:506, expScores:105, srow:1958717
34981 chr19 11688969 11689476 wgEncodeRegTfbsClusteredV3 MYC score:293, expCount:4, expNums:487,488,489,620, expScores:283,161,293,131, srow:1958718
34981 chr19 11688993 11689332 wgEncodeRegTfbsClusteredV3 CHD2 score:166, expCount:1, expNums:479, expScores:166, srow:1958719
34981 chr19 11689003 11690217 wgEncodeRegTfbsClusteredV3 POLR2A score:782, expCount:11, expNums:32,105,228,328,330,332,334,336,338,340,602, expScores:183,782,271,736,438,507,292,269,276,188,214, srow:1958720
34981 chr19 11689012 11689374 wgEncodeRegTfbsClusteredV3 STAT1 score:251, expCount:2, expNums:538,539, expScores:251,182, srow:1958721
34981 chr19 11689020 11689529 wgEncodeRegTfbsClusteredV3 SAP30 score:117, expCount:1, expNums:34, expScores:117, srow:1958722
34981 chr19 11689052 11689421 wgEncodeRegTfbsClusteredV3 MAZ score:204, expCount:1, expNums:512, expScores:204, srow:1958723
34981 chr19 11689065 11689520 wgEncodeRegTfbsClusteredV3 JUND score:263, expCount:2, expNums:507,594, expScores:259,263, srow:1958724
34981 chr19 11689071 11689420 wgEncodeRegTfbsClusteredV3 STAT5A score:250, expCount:1, expNums:237, expScores:250, srow:1958725
34981 chr19 11689073 11689514 wgEncodeRegTfbsClusteredV3 ELF1 score:221, expCount:3, expNums:88,175,217, expScores:162,221,133, srow:1958726
34981 chr19 11689079 11689434 wgEncodeRegTfbsClusteredV3 MAX score:229, expCount:2, expNums:223,511, expScores:219,229, srow:1958727
34981 chr19 11689085 11689328 wgEncodeRegTfbsClusteredV3 EGR1 score:266, expCount:1, expNums:216, expScores:266, srow:1958728
34981 chr19 11689085 11689500 wgEncodeRegTfbsClusteredV3 TRIM28 score:217, expCount:1, expNums:242, expScores:217, srow:1958729
34981 chr19 11689088 11689583 wgEncodeRegTfbsClusteredV3 HMGN3 score:292, expCount:1, expNums:501, expScores:292, srow:1958730
34981 chr19 11689093 11689477 wgEncodeRegTfbsClusteredV3 EP300 score:736, expCount:2, expNums:29,519, expScores:736,643, srow:1958731
34981 chr19 11689093 11689548 wgEncodeRegTfbsClusteredV3 CCNT2 score:417, expCount:1, expNums:476, expScores:417, srow:1958732
34981 chr19 11689096 11689535 wgEncodeRegTfbsClusteredV3 CBX3 score:275, expCount:1, expNums:211, expScores:275, srow:1958733
34981 chr19 11689101 11689304 wgEncodeRegTfbsClusteredV3 SPI1 score:319, expCount:1, expNums:230, expScores:319, srow:1958734
34981 chr19 11689103 11689398 wgEncodeRegTfbsClusteredV3 BHLHE40 score:1000, expCount:2, expNums:423,472, expScores:166,1000, srow:1958735
34981 chr19 11689104 11689507 wgEncodeRegTfbsClusteredV3 ZBTB7A score:155, expCount:1, expNums:247, expScores:155, srow:1958736
34981 chr19 11689131 11689360 wgEncodeRegTfbsClusteredV3 REST score:196, expCount:1, expNums:226, expScores:196, srow:1958737
34981 chr19 11689139 11689442 wgEncodeRegTfbsClusteredV3 GATA2 score:173, expCount:2, expNums:221,498, expScores:173,148, srow:1958738
  • Page 1 of 2
  • 25 of 42 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
34981 cellmeth_recounts PrEC: 17, LNCaP: 113, DU145: 5
34981 cellmeth_diffreps_PrECvsLNCaP A=11, B=80, Length=580, Event=Up, log2FC=2.86, padj=1.64360313938479e-12
34981 cellmeth_diffreps_PrECvsDU145 A=17, B=1, Length=200, Event=Down, log2FC=-4.09, padj=0.00138789698671783
34981 cellmeth_diffreps_LNCaPvsDU145 A=96.21, B=2.81, Length=740, Event=Down, log2FC=-5.1, padj=0
34981 cellexp id=ENSG00000102575, name=ACP5, PrEC=647, str=3080, LNCaP=18, str=11, DU145=6, str=5
34981 cellexp id=ENSG00000198551, name=ZNF627, PrEC=737, str=1294, LNCaP=1573, str=1600, DU145=451, str=493
34981 tcgameth site:cg00481884, B=0.52, L=0.67, H=0.66
34981 tcgameth site:cg00487737, B=0.33, L=0.51, H=0.5
34981 tcgameth site:cg01602621, B=0.4, L=0.67, H=0.64
34981 tcgameth site:cg02874942, B=0.25, L=0.61, H=0.56
34981 tcgameth site:cg03302259, B=0.61, L=0.72, H=0.73
34981 tcgameth site:cg03719155, B=0.55, L=0.7, H=0.68
34981 tcgameth site:cg04566159, B=0.39, L=0.62, H=0.61
34981 tcgameth site:cg08599448, B=0.21, L=0.51, H=0.48
34981 tcgameth site:cg26570683, B=0.46, L=0.55, H=0.55
34981 tcgameth site:cg27002699, B=0.26, L=0.49, H=0.47
34981 tcgameth site:cg27542552, B=0.22, L=0.49, H=0.47
34981 tcgaexp gene=ACP5, entrez=54, pos=chr19:11685475-11689801(-), B=2129, L=1920, M=2289, H=1456