DMR 35851 chr21:38068101-38069950 (1850bp)

DMR Stats
Positionchr21:38068101-38069950 (View on UCSC)
Width1850bp
Genomic Contextintergenic
Nearest GenesSIM2 (2040bp away)
ANODEV p-value0.000705195636107
FrequenciesBenign: 1.0 (14.29%), Low: 6.0 (100.0%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
35851 chr21 38067126 38068395 wgEncodeRegDnaseClusteredV2 38 score:686, srow:746268
35851 chr21 38068446 38068630 wgEncodeRegDnaseClusteredV2 5 score:385, srow:746269
35851 chr21 38068786 38069495 wgEncodeRegDnaseClusteredV2 29 score:413, srow:746270
35851 chr21 38069506 38072575 wgEncodeRegDnaseClusteredV2 80 score:1000, srow:746271
35851 chr21 38064154 38075221 wgEncodeRegTfbsClusteredV3 EZH2 score:857, expCount:10, expNums:6,15,17,19,21,25,36,38,40,43, expScores:304,256,158,103,338,213,240,196,208,296, srow:2601293
35851 chr21 38067867 38068466 wgEncodeRegTfbsClusteredV3 CTBP2 score:190, expCount:1, expNums:348, expScores:190, srow:2601300
35851 chr21 38068005 38070441 wgEncodeRegTfbsClusteredV3 SUZ12 score:318, expCount:2, expNums:358,578, expScores:169,192, srow:2601301
35851 chr21 38068041 38068296 wgEncodeRegTfbsClusteredV3 HDAC2 score:157, expCount:1, expNums:141, expScores:157, srow:2601302
35851 chr21 38069600 38070215 wgEncodeRegTfbsClusteredV3 CHD1 score:243, expCount:1, expNums:4, expScores:243, srow:2601303
35851 chr21 38069665 38070488 wgEncodeRegTfbsClusteredV3 CTBP2 score:201, expCount:1, expNums:348, expScores:128, srow:2601304
35851 chr21 38069698 38069967 wgEncodeRegTfbsClusteredV3 HDAC6 score:143, expCount:1, expNums:28, expScores:143, srow:2601305
35851 chr21 38069871 38070154 wgEncodeRegTfbsClusteredV3 RAD21 score:227, expCount:2, expNums:149,355, expScores:227,173, srow:2601306
35851 chr21 38069898 38070167 wgEncodeRegTfbsClusteredV3 CTCF score:111, expCount:1, expNums:5, expScores:111, srow:2601307
35851 chr21 38068296 38068311 tfbsConsSites V$TAL1BETAE47_01 score:842, zScore:1.78, srow:3195011
35851 chr21 38068299 38068319 tfbsConsSites V$PAX6_01 score:800, zScore:2.62, srow:3195012
35851 chr21 38068310 38068324 tfbsConsSites V$OCT1_02 score:848, zScore:1.96, srow:3195013
35851 chr21 38068318 38068333 tfbsConsSites V$TAL1ALPHAE47_01 score:869, zScore:1.82, srow:3195014
35851 chr21 38069462 38069469 tfbsConsSites V$NKX25_02 score:978, zScore:2.85, srow:3195015
35851 chr21 38069472 38069499 tfbsConsSites V$PAX5_02 score:773, zScore:1.85, srow:3195016
35851 chr21 38069798 38069815 tfbsConsSites V$AHR_01 score:805, zScore:2.37, srow:3195017
35851 chr21 38068238 38068242 phastConsElements100way lod=15 score:262, srow:5506598
35851 chr21 38068259 38068266 phastConsElements100way lod=32 score:337, srow:5506599
35851 chr21 38068299 38068330 phastConsElements100way lod=102 score:451, srow:5506600
35851 chr21 38068352 38068356 phastConsElements100way lod=14 score:255, srow:5506601
35851 chr21 38068368 38068405 phastConsElements100way lod=108 score:457, srow:5506602
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Omics Overlaps

Dmrid Omic Set Data Plot
35851 cellmeth_recounts PrEC: 459, LNCaP: 233, DU145: 90
35851 cellmeth_diffreps_PrECvsLNCaP A=212, B=61, Length=560, Event=Down, log2FC=-1.8, padj=0
35851 cellmeth_diffreps_PrECvsLNCaP A=616, B=166, Length=1480, Event=Down, log2FC=-1.89, padj=0
35851 cellmeth_diffreps_PrECvsDU145 A=221, B=26, Length=700, Event=Down, log2FC=-3.09, padj=0
35851 cellmeth_diffreps_PrECvsDU145 A=620, B=60, Length=1540, Event=Down, log2FC=-3.37, padj=0
35851 cellmeth_diffreps_LNCaPvsDU145 A=53.45, B=14.03, Length=360, Event=Down, log2FC=-1.93, padj=0.000144675370081997
35851 cellmeth_diffreps_LNCaPvsDU145 A=107.97, B=23.39, Length=780, Event=Down, log2FC=-2.21, padj=7.12749857965321e-12
35851 tcgameth site:cg02730156, B=0.3, L=0.34, H=0.4
35851 tcgameth site:cg06368184, B=0.37, L=0.44, H=0.56
35851 tcgameth site:cg09408917, B=0.39, L=0.49, H=0.59
35851 tcgameth site:cg17727929, B=0.33, L=0.47, H=0.56
35851 tcgameth site:cg24127719, B=0.39, L=0.56, H=0.65
35851 tcgameth site:cg24459147, B=0.37, L=0.44, H=0.54