DMR 36111 chr22:38965851-38966100 (250bp)

DMR Stats
Positionchr22:38965851-38966100 (View on UCSC)
Width250bp
Genomic Contextpromoter
Nearest GenesDMC1 (0bp away)
ANODEV p-value7.90743699435e-09
FrequenciesBenign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
36111 DMC1 19512 uc003avz.2 chr22 38914954 38966201 - 250 100.0 0.31 0 100.0 E1 (21.2), I1 (78.8), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0) 0.0
36111 DMC1 19512 uc003awa.2 chr22 38945367 38966201 - 250 100.0 0.04 0 100.0 E1 (21.2), I1 (78.8), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0) 0.0
36111 DMC1 19512 uc031rxs.1 chr22 38965295 38966201 - 250 100.0 0.04 1 100.0 E1 (21.2), I1 (78.8), E2 (0) 100.0
  • 3 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
36111 chr22 38965546 38965935 wgEncodeRegDnaseClusteredV2 18 score:451, srow:770743
36111 chr22 38965966 38966130 wgEncodeRegDnaseClusteredV2 2 score:754, srow:770744
36111 chr22 38965644 38965959 wgEncodeRegTfbsClusteredV3 YY1 score:148, expCount:1, expNums:245, expScores:148, srow:2687826
36111 chr22 38965684 38966991 wgEncodeRegTfbsClusteredV3 RBBP5 score:239, expCount:2, expNums:8,33, expScores:200,239, srow:2687827
36111 chr22 38965697 38965874 wgEncodeRegTfbsClusteredV3 TAF1 score:286, expCount:1, expNums:157, expScores:286, srow:2687828
36111 chr22 38965727 38966230 wgEncodeRegTfbsClusteredV3 CHD1 score:154, expCount:1, expNums:23, expScores:154, srow:2687829
36111 chr22 38965760 38966415 wgEncodeRegTfbsClusteredV3 E2F1 score:294, expCount:1, expNums:572, expScores:294, srow:2687830
36111 chr22 38965794 38966808 wgEncodeRegTfbsClusteredV3 KDM5B score:268, expCount:1, expNums:31, expScores:254, srow:2687831
36111 chr22 38965846 38966361 wgEncodeRegTfbsClusteredV3 PML score:217, expCount:1, expNums:227, expScores:217, srow:2687832
36111 chr22 38965868 38966143 wgEncodeRegTfbsClusteredV3 SPI1 score:274, expCount:2, expNums:107,126, expScores:181,274, srow:2687833
36111 chr22 38965870 38966093 wgEncodeRegTfbsClusteredV3 SRF score:220, expCount:1, expNums:113, expScores:220, srow:2687834
36111 chr22 38965874 38966246 wgEncodeRegTfbsClusteredV3 PHF8 score:865, expCount:1, expNums:30, expScores:865, srow:2687835
36111 chr22 38965879 38966827 wgEncodeRegTfbsClusteredV3 POLR2A score:1000, expCount:30, expNums:61,62,78,105,147,163,192,228,229,306,326,328,330,332,334,336,338,340,366,402,521,522,523,525,577,585,596,599,610,622, expScores:517,248,231,886,580,412,428,456,739,262,522,224,241,401,245,256,233,229,189,811,161,288,200,396,180,218,210,136,131,241, srow:2687836
36111 chr22 38965910 38966265 wgEncodeRegTfbsClusteredV3 TAF7 score:150, expCount:1, expNums:158, expScores:150, srow:2687837
36111 chr22 38965917 38966292 wgEncodeRegTfbsClusteredV3 TBP score:175, expCount:1, expNums:545, expScores:175, srow:2687838
36111 chr22 38965921 38966569 wgEncodeRegTfbsClusteredV3 MYC score:197, expCount:2, expNums:488,575, expScores:120,197, srow:2687839
36111 chr22 38965955 38966713 wgEncodeRegTfbsClusteredV3 TAF1 score:331, expCount:4, expNums:115,157,199,238, expScores:150,314,193,302, srow:2687840
36111 chr22 38965967 38966286 wgEncodeRegTfbsClusteredV3 POU2F2 score:245, expCount:1, expNums:106, expScores:245, srow:2687841
36111 chr22 38965981 38966318 wgEncodeRegTfbsClusteredV3 E2F4 score:159, expCount:2, expNums:291,494, expScores:159,108, srow:2687842
36111 chr22 38966019 38966274 wgEncodeRegTfbsClusteredV3 RUNX3 score:1000, expCount:1, expNums:109, expScores:1000, srow:2687843
36111 chr22 38966073 38966261 wgEncodeRegTfbsClusteredV3 E2F6 score:271, expCount:1, expNums:215, expScores:271, srow:2687844
36111 chr22 38966018 38966029 tfbsConsSites V$E2F_03 score:861, zScore:1.89, srow:3246187
36111 chr22 38966040 38966049 tfbsConsSites V$NCX_01 score:890, zScore:2.2, srow:3246188
36111 chr22 38966010 38966014 phastConsElements100way lod=13 score:247, srow:5613803
36111 chr22 38965734 38966196 cpgIsland CpG: 36 length:463, cpgNum:36, gcNum:279, perCpg:15.6, perGc:60.3, obsExp:0.87, srow:17830
  • 25 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
36111 cellmeth_recounts PrEC: 0, LNCaP: 11, DU145: 0
36111 cellexp id=ENSG00000100206, name=DMC1, PrEC=134, str=0, LNCaP=4, str=1, DU145=107, str=120
36111 tcgameth site:cg20120491, B=0.23, L=0.46, H=0.44
36111 tcgaexp gene=DMC1, entrez=11144, pos=chr22:38914954-38966201(-), B=31, L=14, M=10, H=30