DMR 36142 chr22:42316101-42316350 (250bp)

DMR Stats
Positionchr22:42316101-42316350 (View on UCSC)
Width250bp
Genomic Contextintron
Nearest GenesbK250D10.C22.8 (0bp away)
ANODEV p-value0.00863749048523
FrequenciesBenign: 2.0 (28.57%), Low: 5.0 (83.33%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
36142 bK250D10.C22.8 19575 uc003bba.1 chr22 42120359 42354544 + 250 100.0 0.04 0 0.0 E1 (0), I1 (100), E2 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
36142 chr22 42315246 42316835 wgEncodeRegDnaseClusteredV2 78 score:1000, srow:773437
36142 chr22 42315109 42317283 wgEncodeRegTfbsClusteredV3 POLR2A score:1000, expCount:21, expNums:104,105,123,124,130,131,283,306,307,308,326,328,330,332,334,336,338,340,525,585,602, expScores:670,781,532,247,358,513,163,308,168,315,363,231,272,819,218,332,382,215,159,218,238, srow:2698580
36142 chr22 42315175 42316102 wgEncodeRegTfbsClusteredV3 MTA3 score:422, expCount:1, expNums:95, expScores:341, srow:2698583
36142 chr22 42315550 42316348 wgEncodeRegTfbsClusteredV3 MAZ score:257, expCount:1, expNums:297, expScores:218, srow:2698593
36142 chr22 42315613 42316106 wgEncodeRegTfbsClusteredV3 POU2F2 score:271, expCount:2, expNums:106,125, expScores:231,271, srow:2698598
36142 chr22 42315670 42316125 wgEncodeRegTfbsClusteredV3 CCNT2 score:112, expCount:1, expNums:476, expScores:112, srow:2698600
36142 chr22 42315767 42316138 wgEncodeRegTfbsClusteredV3 SP1 score:173, expCount:2, expNums:112,153, expScores:173,157, srow:2698603
36142 chr22 42315963 42316278 wgEncodeRegTfbsClusteredV3 EBF1 score:493, expCount:1, expNums:292, expScores:493, srow:2698605
36142 chr22 42316046 42316455 wgEncodeRegTfbsClusteredV3 TBL1XR1 score:159, expCount:1, expNums:316, expScores:159, srow:2698606
36142 chr22 42316193 42316572 wgEncodeRegTfbsClusteredV3 CHD2 score:150, expCount:1, expNums:288, expScores:150, srow:2698607
36142 chr22 42316197 42316632 wgEncodeRegTfbsClusteredV3 CHD1 score:177, expCount:1, expNums:287, expScores:177, srow:2698608
36142 chr22 42316209 42316588 wgEncodeRegTfbsClusteredV3 TBP score:235, expCount:1, expNums:317, expScores:235, srow:2698609
36142 chr22 42316219 42316654 wgEncodeRegTfbsClusteredV3 MAX score:202, expCount:1, expNums:296, expScores:202, srow:2698610
36142 chr22 42316246 42316615 wgEncodeRegTfbsClusteredV3 EP300 score:169, expCount:1, expNums:304, expScores:169, srow:2698611
36142 chr22 42316347 42316942 wgEncodeRegTfbsClusteredV3 NFATC1 score:413, expCount:1, expNums:96, expScores:413, srow:2698612
36142 chr22 42315503 42316409 cpgIsland CpG: 76 length:907, cpgNum:76, gcNum:630, perCpg:16.8, perGc:69.5, obsExp:0.7, srow:17904
  • 16 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
36142 cellmeth_recounts PrEC: 9, LNCaP: 231, DU145: 14
36142 cellmeth_diffreps_PrECvsLNCaP A=15, B=477, Length=1200, Event=Up, log2FC=4.99, padj=0
36142 cellmeth_diffreps_LNCaPvsDU145 A=509.93, B=14.97, Length=1220, Event=Down, log2FC=-5.09, padj=0
36142 tcgameth site:cg00305281, B=0.26, L=0.55, H=0.52