DMR 36441 chrX:134554851-134555050 (200bp)

DMR Stats
PositionchrX:134554851-134555050 (View on UCSC)
Width200bp
Genomic Contextpromoter
Nearest GenesLINC00086 (817bp away)
ANODEV p-value0.0230901593467
FrequenciesBenign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
36441 chrX 134554969 134554975 phastConsElements100way lod=14 score:255, srow:10022436
36441 chrX 134553639 134555638 cpgShore — values(x.gr)[overs$srow, ]:51304
  • 2 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
36441 cellmeth_recounts PrEC: 9, LNCaP: 40, DU145: 3
36441 cellmeth_diffreps_PrECvsDU145 A=13, B=0, Length=260, Event=Down, log2FC=-Inf, padj=0.000941091010072773
36441 cellmeth_diffreps_LNCaPvsDU145 A=34.21, B=1.87, Length=420, Event=Down, log2FC=-4.19, padj=8.47254206959061e-07
36441 tcgaexp gene=IL9R, entrez=3581, pos=chrX:59330252-155240482(+), B=6, L=4, M=6, H=9
36441 tcgaexp gene=VAMP7, entrez=6845, pos=chrX:59213949-155173433(+), B=2541, L=2446, M=2565, H=2891
36441 tcgaexp gene=SPRY3, entrez=10251, pos=chrX:59100457-155012117(+), B=156, L=117, M=100, H=75