DMR 36491 chrY:21664901-21665150 (250bp)
| DMR Stats | |
|---|---|
| Position | chrY:21664901-21665150 (View on UCSC) |
| Width | 250bp |
| Genomic Context | promoter |
| Nearest Genes | BCORP1 (0bp away) |
| ANODEV p-value | 0.0425507556694 |
| Frequencies | Benign: 2.0 (28.57%), Low: 6.0 (100.0%), High: 8.0 (88.89 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36491 | BCORP1 | 31781 | uc004fua.1 | chrY | 21617317 | 21665039 | - | 139 | 55.6 | 0.07 | 1 | 100.0 | E1 (48.8), I1 (6.8), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0) | 0.0 |
| 36491 | BCORP1 | 31781 | uc004fub.1 | chrY | 21617317 | 21665039 | - | 139 | 55.6 | 0.06 | 1 | 100.0 | E1 (48.8), I1 (6.8), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0) | 0.0 |
| 36491 | BCORP1 | 31781 | uc011nav.1 | chrY | 21628342 | 21665039 | - | 139 | 55.6 | 0.06 | 0 | 100.0 | E1 (48.8), I1 (6.8), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0) | 0.0 |
- 3 geness
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 36491 | chrY | 21665101 | 21665350 | wgEncodeRegDnaseClusteredV2 | 3 | score:315, srow:1281803 |
| 36491 | chrY | 21665105 | 21665479 | wgEncodeRegTfbsClusteredV3 | CTCF | score:1000, expCount:13, expNums:0,5,48,49,137,595,606,638,650,652,654,664,686, expScores:1000,167,86,103,156,474,157,197,708,163,172,128,158, srow:4380270 |
| 36491 | chrY | 21665133 | 21665372 | wgEncodeRegTfbsClusteredV3 | RAD21 | score:417, expCount:1, expNums:149, expScores:417, srow:4380271 |
| 36491 | chrY | 21664936 | 21664945 | tfbsConsSites | V$NFKAPPAB50_01 | score:859, zScore:1.7, srow:5794591 |
| 36491 | chrY | 21664938 | 21664945 | tfbsConsSites | V$STAT3_02 | score:993, zScore:1.81, srow:5794592 |
| 36491 | chrY | 21664965 | 21664980 | tfbsConsSites | V$ARP1_01 | score:803, zScore:1.95, srow:5794593 |
| 36491 | chrY | 21664924 | 21664931 | phastConsElements100way | lod=23 | score:304, srow:10109754 |
| 36491 | chrY | 21664482 | 21665063 | cpgIsland | CpG: 41 | length:582, cpgNum:41, gcNum:349, perCpg:14.1, perGc:60, obsExp:0.8, srow:28671 |
| 36491 | chrY | 21665064 | 21667063 | cpgShore | — | values(x.gr)[overs$srow, ]:51874 |
- 9 featuress
