DMR 36493 chr1:846751-846950 (200bp)

DMR Stats
Positionchr1:846751-846950 (View on UCSC)
Width200bp
Genomic Contextpromoter
Nearest GenesAK056486 (0bp away)
ANODEV p-value0.000539733195602
FrequenciesBenign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 2.0 (22.22 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
36493 AK056486 28 uc001abu.1 chr1 846815 850328 + 136 68.0 0.06 1 100.0 E1 (19.5), I1 (49), E2 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
36493 chr1 846586 846870 wgEncodeRegDnaseClusteredV2 47 score:1000, srow:112
36493 chr1 846328 846923 wgEncodeRegTfbsClusteredV3 ZNF263 score:516, expCount:1, expNums:368, expScores:516, srow:304
36493 chr1 846461 846844 wgEncodeRegTfbsClusteredV3 MYC score:153, expCount:1, expNums:487, expScores:153, srow:305
36493 chr1 846475 846870 wgEncodeRegTfbsClusteredV3 JUNB score:136, expCount:1, expNums:593, expScores:136, srow:306
36493 chr1 846509 846878 wgEncodeRegTfbsClusteredV3 MAZ score:282, expCount:1, expNums:512, expScores:282, srow:307
36493 chr1 846512 846847 wgEncodeRegTfbsClusteredV3 POLR2A score:158, expCount:1, expNums:256, expScores:158, srow:308
36493 chr1 846527 846836 wgEncodeRegTfbsClusteredV3 BHLHE40 score:284, expCount:1, expNums:472, expScores:284, srow:309
36493 chr1 846543 846858 wgEncodeRegTfbsClusteredV3 EP300 score:211, expCount:1, expNums:263, expScores:211, srow:310
36493 chr1 846552 846787 wgEncodeRegTfbsClusteredV3 ATF3 score:173, expCount:1, expNums:208, expScores:173, srow:311
36493 chr1 846578 846967 wgEncodeRegTfbsClusteredV3 MAX score:225, expCount:1, expNums:223, expScores:225, srow:312
36493 chr1 846579 846858 wgEncodeRegTfbsClusteredV3 JUND score:286, expCount:1, expNums:507, expScores:286, srow:313
36493 chr1 846581 846876 wgEncodeRegTfbsClusteredV3 RCOR1 score:217, expCount:1, expNums:492, expScores:217, srow:314
36493 chr1 846587 846816 wgEncodeRegTfbsClusteredV3 FOSL1 score:154, expCount:1, expNums:219, expScores:154, srow:315
36493 chr1 846620 846863 wgEncodeRegTfbsClusteredV3 EGR1 score:168, expCount:1, expNums:216, expScores:168, srow:316
36493 chr1 845884 847883 cpgShore — values(x.gr)[overs$srow, ]:26
  • 15 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
36493 cellmeth_recounts PrEC: 1, LNCaP: 84, DU145: 0
36493 cellmeth_diffreps_PrECvsLNCaP A=39, B=956, Length=2040, Event=Up, log2FC=4.62, padj=0
36493 cellmeth_diffreps_LNCaPvsDU145 A=1022.01, B=12.16, Length=2080, Event=Down, log2FC=-6.39, padj=0
36493 cellexp id=ENSG00000230699, name=RP11-54O7.1, PrEC=1, str=4, LNCaP=923, str=461, DU145=129, str=64
36493 cellexp id=ENSG00000272438, name=RP11-54O7.16, PrEC=0, str=7, LNCaP=239, str=117, DU145=25, str=13
36493 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
36493 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305