DMR Stats
Positionchr1:1174601-1174750 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesFAM132A (3075bp away)
ANODEV p-value0.0254885878504
FrequenciesBenign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 4.0 (44.44 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
36498 chr1 1173866 1176515 wgEncodeRegDnaseClusteredV2 59 score:1000, srow:459
36498 chr1 1174033 1174722 wgEncodeRegTfbsClusteredV3 POLR2A score:351, expCount:1, expNums:402, expScores:351, srow:2455
36498 chr1 1174190 1174705 wgEncodeRegTfbsClusteredV3 TFAP2C score:154, expCount:1, expNums:370, expScores:154, srow:2456
36498 chr1 1174741 1175016 wgEncodeRegTfbsClusteredV3 ELF1 score:134, expCount:1, expNums:217, expScores:134, srow:2457
36498 chr1 1174264 1177885 cpgShore values(x.gr)[overs$srow, ]:104
  • 5 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
36498 cellmeth_recounts PrEC: 16, LNCaP: 58, DU145: 0
36498 cellmeth_diffreps_PrECvsDU145 A=67, B=1, Length=580, Event=Down, log2FC=-6.07, padj=0
36498 cellmeth_diffreps_LNCaPvsDU145 A=394.48, B=0.94, Length=1740, Event=Down, log2FC=-8.72, padj=0
36498 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
36498 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305