DMR Stats
Positionchr1:1372701-1372850 (View on UCSC)
Width150bp
Genomic Contextexon
Nearest GenesVWA1 (0bp away)
ANODEV p-value0.018844004522
FrequenciesBenign: 0.0 (0.0%), Low: 1.0 (16.67%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
36506 VWA1 69 uc001afr.3 chr1 1370903 1378262 + 150 100.0 0.02 0 0.0 E1 (0), I1 (0.67), E2 (99.33), I2 (0), E3 (0) 0.0
36506 VWA1 69 uc001afs.3 chr1 1370903 1378262 + 150 100.0 0.02 0 0.0 E1 (0), I1 (0), E2 (100), I2 (0), E3 (0) 0.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
36506 chr1 1372421 1373275 wgEncodeRegDnaseClusteredV2 20 score:686, srow:670
36506 chr1 1372715 1372725 tfbsConsSites V$AP1FJ_Q2 score:926, zScore:2.04, srow:1589
36506 chr1 1372716 1372727 tfbsConsSites V$CREB_02 score:857, zScore:1.79, srow:1590
36506 chr1 1372725 1372748 tfbsConsSites V$COMP1_01 score:796, zScore:1.91, srow:1591
36506 chr1 1372740 1372757 tfbsConsSites V$RFX1_02 score:848, zScore:2.26, srow:1592
36506 chr1 1372765 1372782 tfbsConsSites V$AP4_01 score:823, zScore:1.85, srow:1593
36506 chr1 1372746 1372746 cosmic COSM528043 srow:848
36506 chr1 1372777 1372777 cosmic COSM326865 srow:849
36506 chr1 1372693 1372718 phastConsElements100way lod=154 score:492, srow:6401
36506 chr1 1372720 1372721 phastConsElements100way lod=34 score:343, srow:6402
36506 chr1 1372726 1372733 phastConsElements100way lod=65 score:407, srow:6403
36506 chr1 1372735 1372742 phastConsElements100way lod=61 score:400, srow:6404
36506 chr1 1372744 1372745 phastConsElements100way lod=27 score:320, srow:6405
36506 chr1 1372747 1372748 phastConsElements100way lod=14 score:255, srow:6406
36506 chr1 1372750 1372755 phastConsElements100way lod=58 score:395, srow:6407
36506 chr1 1372760 1372766 phastConsElements100way lod=48 score:377, srow:6408
36506 chr1 1372771 1372771 phastConsElements100way lod=14 score:255, srow:6409
36506 chr1 1372774 1372775 phastConsElements100way lod=26 score:316, srow:6410
36506 chr1 1372777 1372781 phastConsElements100way lod=50 score:381, srow:6411
36506 chr1 1372786 1372787 phastConsElements100way lod=23 score:304, srow:6412
36506 chr1 1372792 1372794 phastConsElements100way lod=31 score:333, srow:6413
36506 chr1 1372798 1372808 phastConsElements100way lod=63 score:404, srow:6414
36506 chr1 1372810 1372814 phastConsElements100way lod=78 score:425, srow:6415
36506 chr1 1372816 1372820 phastConsElements100way lod=57 score:394, srow:6416
36506 chr1 1372822 1372826 phastConsElements100way lod=34 score:343, srow:6417
  • Page 1 of 2
  • 25 of 29 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
36506 cellmeth_recounts PrEC: 15, LNCaP: 183, DU145: 1
36506 cellmeth_diffreps_PrECvsLNCaP A=68, B=433, Length=1120, Event=Up, log2FC=2.67, padj=0
36506 cellmeth_diffreps_PrECvsDU145 A=67, B=7, Length=620, Event=Down, log2FC=-3.26, padj=8.97894501171479e-12
36506 cellmeth_diffreps_LNCaPvsDU145 A=457.55, B=14.97, Length=1040, Event=Down, log2FC=-4.93, padj=0
36506 cellexp id=ENSG00000179403, name=VWA1, PrEC=3375, str=1848, LNCaP=6035, str=4905, DU145=1828, str=1228
36506 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
36506 tcgaexp gene=VWA1, entrez=64856, pos=chr1:1370903-1378262(+), B=16879, L=17310, M=14366, H=11700
36506 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305