DMR 36514 chr1:2141601-2141800 (200bp)

DMR Stats
Positionchr1:2141601-2141800 (View on UCSC)
Width200bp
Genomic Contextintergenic
Nearest GenesC1orf86 (2428bp away)
ANODEV p-value0.00325409805097
FrequenciesBenign: 1.0 (14.29%), Low: 1.0 (16.67%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
36514 chr1 2141546 2141775 wgEncodeRegDnaseClusteredV2 9 score:732, srow:1329
36514 chr1 2141489 2141812 wgEncodeRegTfbsClusteredV3 E2F6 score:198, expCount:1, expNums:215, expScores:198, srow:6640
36514 chr1 2141590 2141611 phastConsElements100way lod=31 score:333, srow:9775
36514 chr1 2141617 2141624 phastConsElements100way lod=22 score:300, srow:9776
36514 chr1 2141639 2141653 phastConsElements100way lod=55 score:390, srow:9777
36514 chr1 2141658 2141661 phastConsElements100way lod=15 score:262, srow:9778
36514 chr1 2141679 2141687 phastConsElements100way lod=41 score:361, srow:9779
36514 chr1 2139352 2142199 cpgShelf — values(x.gr)[overs$srow, ]:164
  • 8 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
36514 cellmeth_recounts PrEC: 0, LNCaP: 8, DU145: 0
36514 cellexp id=ENSG00000162585, name=C1orf86, PrEC=1996, str=716, LNCaP=3035, str=1935, DU145=1944, str=1482
36514 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
36514 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305