DMR 36520 chr1:2184151-2184300 (150bp)

DMR Stats
Positionchr1:2184151-2184300 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesSKI (0bp away)
ANODEV p-value0.00135652568572
FrequenciesBenign: 3.0 (42.86%), Low: 3.0 (50.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
36520 SKI 98 uc001aja.4 chr1 2160134 2241652 + 150 100.0 0.23 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields

Omics Overlaps

Dmrid Omic Set Data Plot
36520 cellmeth_recounts PrEC: 29, LNCaP: 6, DU145: 9
36520 cellmeth_diffreps_PrECvsLNCaP A=43, B=6, Length=380, Event=Down, log2FC=-2.84, padj=1.25450585924422e-06
36520 cellmeth_diffreps_PrECvsDU145 A=43, B=7, Length=340, Event=Down, log2FC=-2.62, padj=6.06593708989129e-06
36520 cellexp id=ENSG00000157933, name=SKI, PrEC=6991, str=5566, LNCaP=6867, str=7040, DU145=2963, str=2843
36520 tcgaexp gene=SKI, entrez=6497, pos=chr1:2160134-2241652(+), B=5692, L=5511, M=5343, H=5668
36520 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
36520 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305