DMR 36529 chr1:2361951-2362300 (350bp)

DMR Stats
Positionchr1:2361951-2362300 (View on UCSC)
Width350bp
Genomic Contextintergenic
Nearest GenesPEX10 (17940bp away)
ANODEV p-value0.00717446533051
FrequenciesBenign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 3.0 (33.33 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
36529 chr1 2361946 2362415 wgEncodeRegDnaseClusteredV2 11 score:406, srow:1562
36529 chr1 2361321 2361996 wgEncodeRegTfbsClusteredV3 KAP1 score:392, expCount:1, expNums:365, expScores:392, srow:7509
36529 chr1 2361389 2361984 wgEncodeRegTfbsClusteredV3 ZNF263 score:287, expCount:1, expNums:368, expScores:287, srow:7510
36529 chr1 2362026 2362041 tfbsConsSites V$TAL1BETAITF2_01 score:876, zScore:2.21, srow:3743
36529 chr1 2362197 2362204 tfbsConsSites V$CREBP1CJUN_01 score:902, zScore:1.77, srow:3744
36529 chr1 2361957 2361967 phastConsElements100way lod=18 score:280, srow:10510
36529 chr1 2362005 2362012 phastConsElements100way lod=23 score:304, srow:10511
36529 chr1 2362060 2362075 phastConsElements100way lod=63 score:404, srow:10512
36529 chr1 2360168 2362167 cpgShore — values(x.gr)[overs$srow, ]:313
36529 chr1 2362168 2364167 cpgShelf — values(x.gr)[overs$srow, ]:188
  • 10 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
36529 cellmeth_recounts PrEC: 5, LNCaP: 4, DU145: 4
36529 cellexp id=ENSG00000149527, name=PLCH2, PrEC=15605, str=15786, LNCaP=478, str=150, DU145=59, str=40
36529 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
36529 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305