DMR 36530 chr1:2459351-2459500 (150bp)

DMR Stats
Positionchr1:2459351-2459500 (View on UCSC)
Width150bp
Genomic Context3' end
Nearest GenesHES5 (683bp away)
ANODEV p-value0.00130057048468
FrequenciesBenign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 2.0 (22.22 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
36530 chr1 2459382 2459697 wgEncodeRegTfbsClusteredV3 EBF1 score:186, expCount:1, expNums:292, expScores:186, srow:7760
36530 chr1 2458260 2460760 cpgShore — values(x.gr)[overs$srow, ]:338
  • 2 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
36530 cellmeth_recounts PrEC: 2, LNCaP: 67, DU145: 1
36530 cellmeth_diffreps_PrECvsLNCaP A=55, B=5736, Length=3620, Event=Up, log2FC=6.7, padj=0
36530 cellmeth_diffreps_LNCaPvsDU145 A=6555.38, B=12.16, Length=5380, Event=Down, log2FC=-9.07, padj=0
36530 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
36530 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305