DMR Stats
Positionchr1:7516901-7517200 (View on UCSC)
Width300bp
Genomic Contextintron
Nearest GenesCAMTA1 (0bp away)
ANODEV p-value0.00108143761423
FrequenciesBenign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
36562 CAMTA1 162 uc001aoi.3 chr1 6845384 7829766 + 300 100.0 0.11 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (100), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0), I17 (0), E18 (0), I18 (0), E19 (0), I19 (0), E20 (0), I20 (0), E21 (0), I21 (0), E22 (0), I22 (0), E23 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
36562 chr1 7516566 7516915 wgEncodeRegDnaseClusteredV2 6 score:268, srow:5943
36562 chr1 7516921 7517195 wgEncodeRegDnaseClusteredV2 4 score:650, srow:5944
  • 2 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
36562 cellmeth_recounts PrEC: 12, LNCaP: 5, DU145: 0
36562 cellmeth_diffreps_PrECvsDU145 A=17, B=0, Length=360, Event=Down, log2FC=-Inf, padj=7.41301388411866e-05
36562 cellexp id=ENSG00000171735, name=CAMTA1, PrEC=1333, str=672, LNCaP=1796, str=1755, DU145=1524, str=1409
36562 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
36562 tcgaexp gene=CAMTA1, entrez=23261, pos=chr1:6845384-7829766(+), B=1373, L=1307, M=1203, H=1168
36562 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305