DMR 36590 chr1:10948501-10948650 (150bp)

DMR Stats
Positionchr1:10948501-10948650 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesC1orf127 (57879bp away)
ANODEV p-value0.000635180481647
FrequenciesBenign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
36590 chr1 10948381 10948735 wgEncodeRegDnaseClusteredV2 31 score:803, srow:8913
36590 chr1 10948298 10948595 wgEncodeRegTfbsClusteredV3 CTCF score:191, expCount:3, expNums:5,662,676, expScores:177,191,175, srow:27959
36590 chr1 10948329 10948568 wgEncodeRegTfbsClusteredV3 RAD21 score:167, expCount:1, expNums:149, expScores:167, srow:27960
36590 chr1 10948499 10948504 phastConsElements100way lod=15 score:262, srow:41880
  • 4 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
36590 cellmeth_recounts PrEC: 8, LNCaP: 251, DU145: 0
36590 cellmeth_diffreps_PrECvsLNCaP A=140, B=1666, Length=2360, Event=Up, log2FC=3.57, padj=0
36590 cellmeth_diffreps_PrECvsDU145 A=12, B=0, Length=280, Event=Down, log2FC=-Inf, padj=0.00174045876043459
36590 cellmeth_diffreps_LNCaPvsDU145 A=1772.48, B=18.71, Length=2260, Event=Down, log2FC=-6.57, padj=0
36590 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
36590 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305