DMR 36659 chr1:22269501-22269650 (150bp)

DMR Stats
Positionchr1:22269501-22269650 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesHSPG2 (5750bp away)
ANODEV p-value0.00269122030876
FrequenciesBenign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
36659 chr1 22269541 22269775 wgEncodeRegDnaseClusteredV2 57 score:1000, srow:17629
36659 chr1 22269248 22269957 wgEncodeRegTfbsClusteredV3 SETDB1 score:299, expCount:1, expNums:589, expScores:299, srow:58173
36659 chr1 22269391 22269700 wgEncodeRegTfbsClusteredV3 BHLHE40 score:223, expCount:1, expNums:472, expScores:223, srow:58174
36659 chr1 22269409 22270068 wgEncodeRegTfbsClusteredV3 KAP1 score:291, expCount:1, expNums:588, expScores:291, srow:58175
36659 chr1 22269417 22269706 wgEncodeRegTfbsClusteredV3 USF2 score:443, expCount:1, expNums:417, expScores:443, srow:58176
36659 chr1 22269438 22269893 wgEncodeRegTfbsClusteredV3 JUND score:588, expCount:3, expNums:184,507,594, expScores:165,588,332, srow:58177
36659 chr1 22269442 22269765 wgEncodeRegTfbsClusteredV3 E2F6 score:151, expCount:1, expNums:215, expScores:151, srow:58178
36659 chr1 22269442 22269841 wgEncodeRegTfbsClusteredV3 FOS score:448, expCount:5, expNums:457,478,556,557,558, expScores:448,144,163,172,191, srow:58179
36659 chr1 22269450 22269845 wgEncodeRegTfbsClusteredV3 JUNB score:130, expCount:1, expNums:593, expScores:130, srow:58180
36659 chr1 22269453 22269808 wgEncodeRegTfbsClusteredV3 MAX score:597, expCount:3, expNums:223,460,511, expScores:597,231,246, srow:58181
36659 chr1 22269466 22269806 wgEncodeRegTfbsClusteredV3 JUN score:276, expCount:4, expNums:458,480,483,484, expScores:276,151,131,180, srow:58182
36659 chr1 22269476 22269859 wgEncodeRegTfbsClusteredV3 MYC score:241, expCount:1, expNums:487, expScores:241, srow:58183
36659 chr1 22269483 22269886 wgEncodeRegTfbsClusteredV3 POLR2A score:223, expCount:1, expNums:228, expScores:223, srow:58184
36659 chr1 22269489 22269728 wgEncodeRegTfbsClusteredV3 USF1 score:575, expCount:3, expNums:202,243,265, expScores:296,575,237, srow:58185
36659 chr1 22269490 22269933 wgEncodeRegTfbsClusteredV3 GATA2 score:344, expCount:2, expNums:221,459, expScores:229,344, srow:58186
36659 chr1 22269497 22269860 wgEncodeRegTfbsClusteredV3 TEAD4 score:407, expCount:1, expNums:240, expScores:407, srow:58187
36659 chr1 22269505 22269740 wgEncodeRegTfbsClusteredV3 ATF3 score:303, expCount:1, expNums:208, expScores:303, srow:58188
36659 chr1 22269580 22269660 wgEncodeRegTfbsClusteredV3 FOSL1 score:423, expCount:1, expNums:219, expScores:423, srow:58189
  • 18 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
36659 cellmeth_recounts PrEC: 1, LNCaP: 25, DU145: 9
36659 cellmeth_diffreps_PrECvsLNCaP A=1, B=20, Length=340, Event=Up, log2FC=4.32, padj=0.000201590809901977
36659 cellmeth_diffreps_LNCaPvsDU145 A=19.24, B=0.94, Length=260, Event=Down, log2FC=-4.36, padj=0.000956274272082085
36659 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
36659 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305