DMR 36665 chr1:22964151-22964300 (150bp)

DMR Stats
Positionchr1:22964151-22964300 (View on UCSC)
Width150bp
Genomic Contextexon
Nearest GenesC1QA (0bp away)
ANODEV p-value0.00146270573417
FrequenciesBenign: 1.0 (14.29%), Low: 0.0 (0.0%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
36665 C1QA 404 uc001bfy.3 chr1 22963118 22966175 + 150 100.0 0.11 0 0.0 E1 (0), I1 (0), E2 (81.33), I2 (19.33), E3 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
36665 chr1 22964126 22964435 wgEncodeRegDnaseClusteredV2 4 score:213, srow:18287
36665 chr1 22964157 22964157 cosmic COSM1198498 srow:13973
36665 chr1 22964166 22964166 cosmic COSM358084 srow:13974
36665 chr1 22964187 22964187 cosmic COSM533307 srow:13975
36665 chr1 22964202 22964202 cosmic COSM1718229 srow:13976
36665 chr1 22964218 22964218 cosmic COSM236370 srow:13977
36665 chr1 22964274 22964274 cosmic COSM221614 srow:13978
36665 chr1 22964159 22964164 phastConsElements100way lod=14 score:255, srow:89500
36665 chr1 22964177 22964180 phastConsElements100way lod=18 score:280, srow:89501
36665 chr1 22964182 22964192 phastConsElements100way lod=56 score:392, srow:89502
36665 chr1 22964200 22964203 phastConsElements100way lod=31 score:333, srow:89503
36665 chr1 22964209 22964210 phastConsElements100way lod=30 score:330, srow:89504
36665 chr1 22964218 22964219 phastConsElements100way lod=32 score:337, srow:89505
36665 chr1 22964227 22964228 phastConsElements100way lod=32 score:337, srow:89506
36665 chr1 22964236 22964243 phastConsElements100way lod=35 score:345, srow:89507
36665 chr1 22964245 22964258 phastConsElements100way lod=103 score:452, srow:89508
36665 chr1 22964263 22964264 phastConsElements100way lod=32 score:337, srow:89509
36665 chr1 22964266 22964270 phastConsElements100way lod=17 score:274, srow:89510
36665 chr1 22964272 22964277 phastConsElements100way lod=61 score:400, srow:89511
  • 19 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
36665 cellmeth_recounts PrEC: 11, LNCaP: 0, DU145: 0
36665 cellmeth_diffreps_PrECvsLNCaP A=17, B=0, Length=380, Event=Down, log2FC=-Inf, padj=5.95437566994235e-05
36665 cellmeth_diffreps_PrECvsDU145 A=17, B=0, Length=380, Event=Down, log2FC=-Inf, padj=7.41301388411866e-05
36665 cellexp id=ENSG00000173372, name=C1QA, PrEC=0, str=0, LNCaP=0, str=0, DU145=0, str=0
36665 tcgameth site:cg25995460, B=0.9, L=0.89, H=0.87
36665 tcgaexp gene=C1QA, entrez=712, pos=chr1:22963118-22966175(+), B=2221, L=2894, M=2527, H=2643
36665 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
36665 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305