DMR Stats | |
---|---|
Position | chr1:24438551-24438700 (View on UCSC) |
Width | 150bp |
Genomic Context | promoter |
Nearest Genes | MYOM3 (0bp away) |
ANODEV p-value | 0.000638558513603 |
Frequencies | Benign: 0.0 (0.0%), Low: 1.0 (16.67%), High: 7.0 (77.78 %) |
Frequent? |
Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
36671 | MYOM3 | 440 | uc001bin.4 | chr1 | 24382531 | 24438665 | - | 115 | 76.67 | 0.24 | 0 | 100.0 | E1 (76.67), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0), I17 (0), E18 (0), I18 (0), E19 (0), I19 (0), E20 (0), I20 (0), E21 (0), I21 (0), E22 (0), I22 (0), E23 (0), I23 (0), E24 (0), I24 (0), E25 (0), I25 (0), E26 (0), I26 (0), E27 (0), I27 (0), E28 (0), I28 (0), E29 (0), I29 (0), E30 (0), I30 (0), E31 (0), I31 (0), E32 (0), I32 (0), E33 (0), I33 (0), E34 (0), I34 (0), E35 (0), I35 (0), E36 (0), I36 (0), E37 (0) | 0.0 |
36671 | MYOM3 | 440 | uc001bio.3 | chr1 | 24392137 | 24438665 | - | 115 | 76.67 | 0.18 | 0 | 100.0 | E1 (76.67), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0), I17 (0), E18 (0), I18 (0), E19 (0), I19 (0), E20 (0), I20 (0), E21 (0), I21 (0), E22 (0), I22 (0), E23 (0), I23 (0), E24 (0), I24 (0), E25 (0), I25 (0), E26 (0), I26 (0), E27 (0), I27 (0), E28 (0), I28 (0), E29 (0) | 0.0 |
Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
---|---|---|---|---|---|---|
36671 | chr1 | 24438401 | 24438615 | wgEncodeRegDnaseClusteredV2 | 7 | score:584, srow:19582 |
36671 | chr1 | 24438666 | 24439295 | wgEncodeRegDnaseClusteredV2 | 120 | score:1000, srow:19583 |
36671 | chr1 | 24438627 | 24438856 | wgEncodeRegTfbsClusteredV3 | CTCF | score:143, expCount:1, expNums:667, expScores:143, srow:65426 |
36671 | chr1 | 24438690 | 24439099 | wgEncodeRegTfbsClusteredV3 | EZH2 | score:245, expCount:1, expNums:25, expScores:245, srow:65427 |
36671 | chr1 | 24438548 | 24438555 | phastConsElements100way | lod=23 | score:304, srow:97358 |
36671 | chr1 | 24438601 | 24438604 | phastConsElements100way | lod=16 | score:268, srow:97359 |
36671 | chr1 | 24438615 | 24438631 | phastConsElements100way | lod=41 | score:361, srow:97360 |
36671 | chr1 | 24438634 | 24438637 | phastConsElements100way | lod=16 | score:268, srow:97361 |
36671 | chr1 | 24438646 | 24438661 | phastConsElements100way | lod=73 | score:418, srow:97362 |
36671 | chr1 | 24438678 | 24438695 | phastConsElements100way | lod=55 | score:390, srow:97363 |
Dmrid | Omic Set | Data | Plot |
---|---|---|---|
36671 | cellmeth_recounts | PrEC: 0, LNCaP: 3, DU145: 0 | |
36671 | cellexp | id=ENSG00000142661, name=MYOM3, PrEC=34, str=521, LNCaP=1, str=1, DU145=3, str=2 | |
36671 | tcgameth | site:cg14564939, B=0.54, L=0.72, H=0.7 | |
36671 | tcgaexp | gene=MYOM3, entrez=127294, pos=chr1:24382531-24438665(-), B=273, L=54, M=253, H=148 | |
36671 | tcgaexp | gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305 | |
36671 | pubmed | gene=MYOM3, G=0, GP=0, GC=0, GM=0, GPM=0, GCM=0 |