DMR 36692 chr1:27427401-27427550 (150bp)

DMR Stats
Positionchr1:27427401-27427550 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesSLC9A1 (0bp away)
ANODEV p-value0.000739238765595
FrequenciesBenign: 1.0 (14.29%), Low: 0.0 (0.0%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
36692 SLC9A1 505 uc001bnl.3 chr1 27425300 27430513 - 150 100.0 0.02 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (100), E7 (0) 0.0
36692 SLC9A1 505 uc001bnm.4 chr1 27425300 27481621 - 150 100.0 0.02 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (100), E12 (0) 0.0
36692 SLC9A1 505 uc010ofk.3 chr1 27425300 27481621 - 150 100.0 0.02 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (100), E11 (0) 0.0
  • 3 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
36692 chr1 27427046 27427515 wgEncodeRegDnaseClusteredV2 16 score:309, srow:22219
  • 1 features

Omics Overlaps

Dmrid Omic Set Data Plot
36692 cellmeth_recounts PrEC: 7, LNCaP: 1, DU145: 0
36692 cellexp id=ENSG00000090020, name=SLC9A1, PrEC=9580, str=12503, LNCaP=4075, str=3284, DU145=2332, str=1804
36692 tcgaexp gene=SLC9A1, entrez=6548, pos=chr1:27425300-27481621(-), B=5121, L=3322, M=3150, H=2985
36692 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305
36692 pubmed gene=SLC9A1, G=402, GP=0, GC=84, GM=1, GPM=0, GCM=0