DMR 36697 chr1:27925301-27925450 (150bp)

DMR Stats
Positionchr1:27925301-27925450 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesAHDC1 (0bp away)
ANODEV p-value0.00195152499843
FrequenciesBenign: 0.0 (0.0%), Low: 1.0 (16.67%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
36697 AHDC1 516 uc001boh.1 chr1 27877380 27930361 - 150 100.0 0.14 0 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0) 0.0
36697 AHDC1 516 uc009vsy.3 chr1 27860756 27930143 - 150 100.0 0.47 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0) 0.0
36697 AHDC1 516 uc009vsz.1 chr1 27873772 27930143 - 150 100.0 0.56 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0) 0.0
  • 3 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
36697 chr1 27925426 27925975 wgEncodeRegDnaseClusteredV2 98 score:1000, srow:22665
36697 chr1 27925236 27925550 wgEncodeRegTfbsClusteredV3 CTCF score:350, expCount:7, expNums:0,597,598,603,605,607,659, expScores:142,135,213,228,350,127,126, srow:80649
  • 2 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
36697 cellmeth_recounts PrEC: 6, LNCaP: 16, DU145: 3
36697 cellexp id=ENSG00000126705, name=AHDC1, PrEC=3024, str=4075, LNCaP=1235, str=963, DU145=2912, str=1833
36697 tcgaexp gene=AHDC1, entrez=27245, pos=chr1:27860756-27930361(-), B=2101, L=1485, M=1357, H=1385
36697 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305