DMR 36732 chr1:38258751-38258900 (150bp)
| DMR Stats | |
|---|---|
| Position | chr1:38258751-38258900 (View on UCSC) |
| Width | 150bp |
| Genomic Context | promoter |
| Nearest Genes | MANEAL (873bp away) |
| ANODEV p-value | 0.000101522422039 |
| Frequencies | Benign: 0.0 (0.0%), Low: 2.0 (33.33%), High: 9.0 (100.0 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 36732 | chr1 | 38258486 | 38258955 | wgEncodeRegDnaseClusteredV2 | 13 | score:334, srow:30480 |
| 36732 | chr1 | 38258489 | 38261352 | wgEncodeRegTfbsClusteredV3 | EZH2 | score:335, expCount:3, expNums:21,36,40, expScores:332,222,229, srow:107571 |
| 36732 | chr1 | 38257096 | 38259095 | cpgShore | — | values(x.gr)[overs$srow, ]:1635 |
- 3 featuress
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 36732 | cellmeth_recounts | PrEC: 20, LNCaP: 112, DU145: 0 |  |
| 36732 | cellmeth_diffreps_PrECvsLNCaP | A=32, B=536, Length=960, Event=Up, log2FC=4.07, padj=0 |  |
| 36732 | cellmeth_diffreps_PrECvsDU145 | A=31, B=0, Length=400, Event=Down, log2FC=-Inf, padj=6.13838086470065e-09 |  |
| 36732 | cellmeth_diffreps_LNCaPvsDU145 | A=573.01, B=2.81, Length=960, Event=Down, log2FC=-7.67, padj=0 |  |
| 36732 | tcgameth | site:cg00801514, B=0.86, L=0.87, H=0.86 |  |
| 36732 | tcgaexp | gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305 |  |
| 36732 | pubmed | gene=MANEAL, G=3, GP=1, GC=2, GM=1, GPM=0, GCM=1 |  |