DMR 36745 chr1:41948951-41949200 (250bp)

DMR Stats
Positionchr1:41948951-41949200 (View on UCSC)
Width250bp
Genomic Contextintron
Nearest GenesEDN2 (0bp away)
ANODEV p-value0.0105659452035
FrequenciesBenign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
36745 EDN2 735 uc001cgu.3 chr1 41944446 41949874 - 250 100.0 0.23 1 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0) 0.0
36745 EDN2 735 uc001cgv.3 chr1 41944446 41949874 - 250 100.0 0.14 1 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0) 0.0
36745 EDN2 735 uc001cgw.3 chr1 41944446 41949874 - 250 100.0 0.23 1 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0) 0.0
36745 EDN2 735 uc001cgx.3 chr1 41944446 41950344 - 250 100.0 0.13 0 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0) 0.0
36745 EDN2 734 uc009vwh.3 chr1 41944446 41949874 - 250 100.0 0.21 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0) 0.0
36745 EDN2 735 uc009vwi.3 chr1 41944446 41949874 - 250 100.0 0.13 1 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0) 0.0
36745 EDN2 735 uc009vwj.3 chr1 41944446 41949874 - 250 100.0 0.21 1 0.0 E1 (0), I1 (100), E2 (0) 0.0
  • 7 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
36745 chr1 41947961 41949315 wgEncodeRegDnaseClusteredV2 58 score:1000, srow:33308
36745 chr1 41948645 41949054 wgEncodeRegTfbsClusteredV3 GATA2 score:240, expCount:1, expNums:586, expScores:240, srow:118514
36745 chr1 41948973 41948990 tfbsConsSites V$NF1_Q6 score:878, zScore:1.81, srow:99288
36745 chr1 41948979 41948993 tfbsConsSites V$E2F_01 score:781, zScore:2.14, srow:99289
36745 chr1 41948981 41948992 tfbsConsSites V$IK2_01 score:949, zScore:2, srow:99290
36745 chr1 41949004 41949020 tfbsConsSites V$HNF1_C score:811, zScore:2.01, srow:99291
36745 chr1 41949044 41949059 tfbsConsSites V$EVI1_01 score:752, zScore:1.83, srow:99292
36745 chr1 41949050 41949068 tfbsConsSites V$OCT1_01 score:821, zScore:2.32, srow:99293
36745 chr1 41949051 41949064 tfbsConsSites V$CEBPB_01 score:887, zScore:1.77, srow:99294
36745 chr1 41949051 41949064 tfbsConsSites V$CEBP_Q2 score:955, zScore:3.24, srow:99295
36745 chr1 41948946 41949077 phastConsElements100way lod=380 score:581, srow:181543
36745 chr1 41949086 41949100 phastConsElements100way lod=24 score:308, srow:181544
36745 chr1 41949109 41949132 phastConsElements100way lod=105 score:454, srow:181545
36745 chr1 41949137 41949144 phastConsElements100way lod=28 score:323, srow:181546
36745 chr1 41949150 41949157 phastConsElements100way lod=21 score:295, srow:181547
36745 chr1 41949184 41949189 phastConsElements100way lod=17 score:274, srow:181548
  • 16 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
36745 cellmeth_recounts PrEC: 0, LNCaP: 0, DU145: 0
36745 cellexp id=ENSG00000127129, name=EDN2, PrEC=4, str=7, LNCaP=105, str=60, DU145=292, str=204
36745 tcgaexp gene=EDN2, entrez=1907, pos=chr1:41944446-41950344(-), B=332, L=185, M=172, H=155
36745 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305