DMR 36755 chr1:44685901-44686100 (200bp)
| DMR Stats | |
|---|---|
| Position | chr1:44685901-44686100 (View on UCSC) |
| Width | 200bp |
| Genomic Context | 3' end |
| Nearest Genes | DMAP1 (0bp away) |
| ANODEV p-value | 0.007466638209 |
| Frequencies | Benign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 6.0 (66.67 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36755 | DMAP1 | 784 | uc001clq.1 | chr1 | 44679125 | 44686351 | + | 200 | 100.0 | 0.06 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (40.5), I10 (60), E11 (0) | 100.0 |
| 36755 | DMAP1 | 784 | uc001clr.1 | chr1 | 44679125 | 44686351 | + | 200 | 100.0 | 0.09 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (40.5), I10 (60), E11 (0) | 100.0 |
| 36755 | DMAP1 | 784 | uc001cls.1 | chr1 | 44679125 | 44686351 | + | 200 | 100.0 | 0.06 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (40.5), I9 (60), E10 (0) | 100.0 |
| 36755 | DMAP1 | 784 | uc010oku.1 | chr1 | 44679125 | 44686351 | + | 200 | 100.0 | 0.06 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (40.5), I10 (60), E11 (0) | 100.0 |
- 4 geness
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 36755 | chr1 | 44685906 | 44686755 | wgEncodeRegDnaseClusteredV2 | 52 | score:1000, srow:35453 |
| 36755 | chr1 | 44685586 | 44686263 | wgEncodeRegTfbsClusteredV3 | POLR2A | score:362, expCount:1, expNums:105, expScores:362, srow:126514 |
| 36755 | chr1 | 44685863 | 44686678 | wgEncodeRegTfbsClusteredV3 | CTCF | score:439, expCount:17, expNums:0,42,44,463,597,603,636,639,640,641,646,659,660,662,672,678,689, expScores:124,116,336,174,129,131,117,125,307,101,130,141,108,141,219,112,177, srow:126515 |
| 36755 | chr1 | 44685940 | 44685954 | tfbsConsSites | V$PBX1_02 | score:808, zScore:1.91, srow:106791 |
| 36755 | chr1 | 44685945 | 44685954 | tfbsConsSites | V$CDPCR3HD_01 | score:920, zScore:2.36, srow:106792 |
| 36755 | chr1 | 44685944 | 44685944 | cosmic | COSM681231 | srow:29923 |
| 36755 | chr1 | 44685960 | 44685960 | cosmic | COSM910002 | srow:29924 |
| 36755 | chr1 | 44685982 | 44685983 | cosmic | COSM910003 | srow:29925 |
| 36755 | chr1 | 44685716 | 44686666 | oreganno | OREG0013438 | id:OREG0013438, srow:759 |
| 36755 | chr1 | 44685904 | 44685905 | phastConsElements100way | lod=14 | score:255, srow:195164 |
| 36755 | chr1 | 44685910 | 44685911 | phastConsElements100way | lod=14 | score:255, srow:195165 |
| 36755 | chr1 | 44685916 | 44685917 | phastConsElements100way | lod=25 | score:312, srow:195166 |
| 36755 | chr1 | 44685919 | 44685920 | phastConsElements100way | lod=17 | score:274, srow:195167 |
| 36755 | chr1 | 44685922 | 44685923 | phastConsElements100way | lod=23 | score:304, srow:195168 |
| 36755 | chr1 | 44685928 | 44685947 | phastConsElements100way | lod=201 | score:518, srow:195169 |
| 36755 | chr1 | 44685949 | 44685950 | phastConsElements100way | lod=38 | score:354, srow:195170 |
| 36755 | chr1 | 44685952 | 44685965 | phastConsElements100way | lod=161 | score:496, srow:195171 |
| 36755 | chr1 | 44685967 | 44685971 | phastConsElements100way | lod=55 | score:390, srow:195172 |
| 36755 | chr1 | 44685973 | 44685986 | phastConsElements100way | lod=184 | score:510, srow:195173 |
| 36755 | chr1 | 44686002 | 44686004 | phastConsElements100way | lod=14 | score:255, srow:195174 |
| 36755 | chr1 | 44686078 | 44686079 | phastConsElements100way | lod=14 | score:255, srow:195175 |
- 21 featuress
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 36755 | cellmeth_recounts | PrEC: 3, LNCaP: 3, DU145: 0 |  |
| 36755 | cellmeth_diffreps_PrECvsDU145 | A=23, B=1, Length=360, Event=Down, log2FC=-4.52, padj=3.84450226825195e-05 |  |
| 36755 | cellexp | id=ENSG00000178028, name=DMAP1, PrEC=1660, str=2389, LNCaP=2822, str=1554, DU145=1278, str=1256 |  |
| 36755 | tcgameth | site:cg03726147, B=0.73, L=0.78, H=0.78 |  |
| 36755 | tcgameth | site:cg18192074, B=0.74, L=0.81, H=0.81 |  |
| 36755 | tcgaexp | gene=DMAP1, entrez=55929, pos=chr1:44679125-44686351(+), B=1662, L=2172, M=2021, H=1674 |  |
| 36755 | tcgaexp | gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305 |  |