DMR 36790 chr1:55740651-55740900 (250bp)

DMR Stats
Positionchr1:55740651-55740900 (View on UCSC)
Width250bp
Genomic Contextintergenic
Nearest GenesMIR4422 (49254bp away)
ANODEV p-value3.78439563695e-05
FrequenciesBenign: 0.0 (0.0%), Low: 1.0 (16.67%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
36790 chr1 55740606 55740790 wgEncodeRegDnaseClusteredV2 2 score:278, srow:42111
36790 chr1 55740865 55741468 wgEncodeRegTfbsClusteredV3 GATA1 score:478, expCount:1, expNums:582, expScores:478, srow:149002
36790 chr1 55740771 55740786 tfbsConsSites V$MEF2_01 score:775, zScore:2.08, srow:136703
36790 chr1 55740799 55740816 tfbsConsSites V$IRF7_01 score:828, zScore:2.26, srow:136704
36790 chr1 55740801 55740809 tfbsConsSites V$AREB6_04 score:979, zScore:2.18, srow:136705
36790 chr1 55740830 55740847 tfbsConsSites V$CEBP_C score:866, zScore:2.97, srow:136706
36790 chr1 55740855 55740872 tfbsConsSites V$SRF_01 score:739, zScore:1.97, srow:136707
36790 chr1 55740855 55740872 tfbsConsSites V$AP4_01 score:814, zScore:1.71, srow:136708
36790 chr1 55740863 55740878 tfbsConsSites V$MEF2_01 score:785, zScore:2.29, srow:136709
36790 chr1 55740747 55740752 phastConsElements100way lod=18 score:280, srow:246773
36790 chr1 55740773 55740784 phastConsElements100way lod=28 score:323, srow:246774
36790 chr1 55740799 55740834 phastConsElements100way lod=140 score:483, srow:246775
36790 chr1 55740836 55740874 phastConsElements100way lod=158 score:495, srow:246776
36790 chr1 55740877 55740887 phastConsElements100way lod=42 score:363, srow:246777
36790 chr1 55740889 55740900 phastConsElements100way lod=44 score:368, srow:246778
  • 15 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
36790 cellmeth_recounts PrEC: 1, LNCaP: 5, DU145: 0
36790 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305