DMR 36809 chr1:71512501-71512750 (250bp)

DMR Stats
Positionchr1:71512501-71512750 (View on UCSC)
Width250bp
Genomic Contextpromoter
Nearest GenesPTGER3, ZRANB2-AS1 (0bp away)
ANODEV p-value0.000234313211058
FrequenciesBenign: 0.0 (0.0%), Low: 1.0 (16.67%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
36809 PTGER3 1031 uc001dfg.1 chr1 71318036 71513491 - 250 100.0 1.37 0 0.0 E1 (100), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0) 0.0
36809 PTGER3 1031 uc001dfh.1 chr1 71318036 71513491 - 250 100.0 1.83 1 0.0 E1 (100), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) 0.0
36809 PTGER3 1031 uc001dfi.1 chr1 71318036 71513491 - 250 100.0 1.83 1 0.0 E1 (100), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) 0.0
36809 PTGER3 1031 uc001dfj.1 chr1 71318036 71513491 - 250 100.0 1.37 1 0.0 E1 (100), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0) 0.0
36809 PTGER3 1031 uc001dfk.1 chr1 71318036 71513491 - 250 100.0 1.83 0 0.0 E1 (100), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0) 0.0
36809 PTGER3 1031 uc001dfl.1 chr1 71318036 71513491 - 250 100.0 15.4 0 0.0 E1 (100), I1 (0), E2 (0), I2 (0), E3 (0) 0.0
36809 PTGER3 1031 uc001dfm.1 chr1 71349401 71513491 - 250 100.0 4.45 1 0.0 E1 (100), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) 0.0
36809 PTGER3 1031 uc001dfn.3 chr1 71349439 71513491 - 250 100.0 3.34 0 0.0 E1 (100), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0) 0.0
36809 PTGER3 1031 uc001dfo.3 chr1 71418115 71513491 - 250 100.0 3.01 0 0.0 E1 (100), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0) 0.0
36809 PTGER3 1031 uc001dfp.1 chr1 71436464 71513491 - 250 100.0 2.26 0 0.0 E1 (100), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0) 0.0
36809 PTGER3 1031 uc001dfq.3 chr1 71471537 71513491 - 250 100.0 2.26 0 0.0 E1 (100), I1 (0), E2 (0) 0.0
36809 ZRANB2-AS1 1032 uc001dfr.3 chr1 71512189 71532865 + 250 100.0 0.18 1 75.2 E1 (100), I1 (0), E2 (0), I2 (0), E3 (0) 0.0
36809 PTGER3 1031 uc009wbm.1 chr1 71327988 71513491 - 250 100.0 0.13 0 0.0 E1 (100), I1 (0), E2 (0), I2 (0), E3 (0) 0.0
36809 PTGER3 1031 uc009wbn.2 chr1 71349439 71513491 - 250 100.0 0.13 0 0.0 E1 (100), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0) 0.0
36809 PTGER3 1031 uc009wbo.3 chr1 71418115 71513491 - 250 100.0 0.13 0 0.0 E1 (100), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0) 0.0
  • 15 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
36809 chr1 71512506 71512675 wgEncodeRegDnaseClusteredV2 3 score:413, srow:48946
36809 chr1 71512706 71513275 wgEncodeRegDnaseClusteredV2 33 score:556, srow:48947
36809 chr1 71512137 71512586 wgEncodeRegTfbsClusteredV3 UBTF score:156, expCount:2, expNums:548,549, expScores:147,156, srow:172109
36809 chr1 71512168 71512551 wgEncodeRegTfbsClusteredV3 MYC score:165, expCount:1, expNums:487, expScores:165, srow:172110
36809 chr1 71512220 71512723 wgEncodeRegTfbsClusteredV3 CHD1 score:157, expCount:1, expNums:23, expScores:157, srow:172111
36809 chr1 71512337 71513976 wgEncodeRegTfbsClusteredV3 EZH2 score:728, expCount:8, expNums:6,15,17,19,21,36,40,43, expScores:331,492,172,115,454,578,208,364, srow:172113
36809 chr1 71512533 71513256 wgEncodeRegTfbsClusteredV3 RBBP5 score:309, expCount:1, expNums:33, expScores:309, srow:172114
36809 chr1 71512543 71512852 wgEncodeRegTfbsClusteredV3 SUZ12 score:115, expCount:1, expNums:358, expScores:115, srow:172115
36809 chr1 71512621 71512870 wgEncodeRegTfbsClusteredV3 TEAD4 score:175, expCount:1, expNums:160, expScores:175, srow:172116
36809 chr1 71512741 71512826 wgEncodeRegTfbsClusteredV3 YY1 score:159, expCount:1, expNums:245, expScores:159, srow:172117
36809 chr1 71512504 71512520 tfbsConsSites V$RFX1_01 score:838, zScore:2.07, srow:175724
36809 chr1 71512612 71512631 tfbsConsSites V$PPARA_01 score:772, zScore:2.38, srow:175725
36809 chr1 71512627 71512643 tfbsConsSites V$HNF1_C score:848, zScore:2.76, srow:175726
36809 chr1 71512633 71512653 tfbsConsSites V$NRSF_01 score:724, zScore:1.94, srow:175727
36809 chr1 71512634 71512653 tfbsConsSites V$ARNT_02 score:812, zScore:2.29, srow:175728
36809 chr1 71512634 71512653 tfbsConsSites V$MYCMAX_03 score:857, zScore:2.73, srow:175729
36809 chr1 71512637 71512650 tfbsConsSites V$MYCMAX_01 score:839, zScore:2.34, srow:175730
36809 chr1 71512638 71512649 tfbsConsSites V$NMYC_01 score:931, zScore:2.46, srow:175731
36809 chr1 71512641 71512658 tfbsConsSites V$MIF1_01 score:785, zScore:2.06, srow:175732
36809 chr1 71512700 71512723 tfbsConsSites V$COMP1_01 score:788, zScore:1.75, srow:175733
36809 chr1 71512711 71512726 tfbsConsSites V$HAND1E47_01 score:835, zScore:1.64, srow:175734
36809 chr1 71512563 71512563 cosmic COSM284352 srow:40217
36809 chr1 71512563 71512563 cosmic COSM284351 srow:40218
36809 chr1 71512563 71512563 cosmic COSM284350 srow:40219
36809 chr1 71512571 71512571 cosmic COSM1584708 srow:40220
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  • 25 of 89 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
36809 cellmeth_recounts PrEC: 1, LNCaP: 103, DU145: 8
36809 cellmeth_diffreps_PrECvsLNCaP A=10, B=133, Length=760, Event=Up, log2FC=3.73, padj=0
36809 cellmeth_diffreps_LNCaPvsDU145 A=143.25, B=6.55, Length=860, Event=Down, log2FC=-4.45, padj=0
36809 cellexp id=ENSG00000050628, name=PTGER3, PrEC=3, str=2, LNCaP=3, str=12, DU145=3, str=1
36809 tcgaexp gene=PTGER3, entrez=5733, pos=chr1:71318036-71513491(-), B=453, L=280, M=226, H=232
36809 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305
36809 pubmed gene=PTGER3, G=356, GP=4, GC=45, GM=1, GPM=0, GCM=1
36809 pubmed gene=ZRANB2-AS1, G=0, GP=0, GC=0, GM=0, GPM=0, GCM=0